Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Brca1P48754 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Brca1P48754 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Brca1P48754 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Brca1P48754 Gm7238-201ENSMUST00000206467 973 ntBASIC13.21□□□□□ -0.29
Brca1P48754 AC154759.1-201ENSMUST00000224137 1159 ntBASIC13.21□□□□□ -0.29
Brca1P48754 Gm8522-201ENSMUST00000118416 1929 ntBASIC13.21□□□□□ -0.29
Brca1P48754 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Brca1P48754 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Brca1P48754 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Brca1P48754 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Brca1P48754 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Brca1P48754 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Brca1P48754 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Brca1P48754 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Brca1P48754 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Brca1P48754 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.21□□□□□ -0.3
Brca1P48754 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Brca1P48754 Smok4a-201ENSMUST00000074512 1455 ntBASIC13.21□□□□□ -0.3
Brca1P48754 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Brca1P48754 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Brca1P48754 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Brca1P48754 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC13.2□□□□□ -0.3
Brca1P48754 Gm13039-201ENSMUST00000118638 794 ntBASIC13.2□□□□□ -0.3
Brca1P48754 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Brca1P48754 Gm9162-201ENSMUST00000182081 991 ntBASIC13.2□□□□□ -0.3
Brca1P48754 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC13.2□□□□□ -0.3
Brca1P48754 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC13.2□□□□□ -0.3
Brca1P48754 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC13.2□□□□□ -0.3
Brca1P48754 CT010486.3-201ENSMUST00000224555 811 ntBASIC13.2□□□□□ -0.3
Brca1P48754 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brca1P48754 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Brca1P48754 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brca1P48754 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.2□□□□□ -0.3
Brca1P48754 Gm43242-201ENSMUST00000199507 1776 ntBASIC13.2□□□□□ -0.3
Brca1P48754 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Brca1P48754 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brca1P48754 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Brca1P48754 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brca1P48754 AC165351.1-201ENSMUST00000219078 2020 ntBASIC13.2□□□□□ -0.3
Brca1P48754 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brca1P48754 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brca1P48754 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Brca1P48754 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brca1P48754 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Brca1P48754 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brca1P48754 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brca1P48754 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC13.2□□□□□ -0.3
Brca1P48754 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brca1P48754 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brca1P48754 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Brca1P48754 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brca1P48754 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brca1P48754 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Brca1P48754 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Brca1P48754 Gm12389-201ENSMUST00000117696 418 ntBASIC13.2□□□□□ -0.3
Brca1P48754 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brca1P48754 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC13.2□□□□□ -0.3
Brca1P48754 Gm26670-202ENSMUST00000226862 340 ntBASIC13.2□□□□□ -0.3
Brca1P48754 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brca1P48754 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brca1P48754 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Brca1P48754 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Brca1P48754 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brca1P48754 Gm1840-201ENSMUST00000051687 1432 ntBASIC13.2□□□□□ -0.3
Brca1P48754 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brca1P48754 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brca1P48754 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brca1P48754 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.19□□□□□ -0.3
Brca1P48754 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Brca1P48754 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Brca1P48754 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brca1P48754 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brca1P48754 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brca1P48754 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brca1P48754 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.19□□□□□ -0.3
Brca1P48754 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brca1P48754 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brca1P48754 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brca1P48754 Gm15196-201ENSMUST00000121406 482 ntBASIC13.19□□□□□ -0.3
Brca1P48754 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Brca1P48754 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC13.19□□□□□ -0.3
Brca1P48754 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Brca1P48754 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brca1P48754 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brca1P48754 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
Brca1P48754 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brca1P48754 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC13.19□□□□□ -0.3
Brca1P48754 Gm30946-201ENSMUST00000198288 724 ntBASIC13.19□□□□□ -0.3
Brca1P48754 Gm44323-201ENSMUST00000198689 129 ntBASIC13.19□□□□□ -0.3
Brca1P48754 Gm6331-201ENSMUST00000217890 450 ntBASIC13.19□□□□□ -0.3
Brca1P48754 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC13.19□□□□□ -0.3
Brca1P48754 AC142266.1-201ENSMUST00000228107 415 ntBASIC13.19□□□□□ -0.3
Brca1P48754 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Brca1P48754 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Brca1P48754 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brca1P48754 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Brca1P48754 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Brca1P48754 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Brca1P48754 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 127.7 ms