Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Gm16107-201ENSMUST00000162523 862 ntBASIC10.54□□□□□ -0.72
GdnfP48540 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
GdnfP48540 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
GdnfP48540 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
GdnfP48540 Gm27514-201ENSMUST00000183692 110 ntBASIC10.54□□□□□ -0.72
GdnfP48540 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.54□□□□□ -0.72
GdnfP48540 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.54□□□□□ -0.72
GdnfP48540 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.54□□□□□ -0.72
GdnfP48540 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC10.54□□□□□ -0.72
GdnfP48540 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.54□□□□□ -0.72
GdnfP48540 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.54□□□□□ -0.72
GdnfP48540 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
GdnfP48540 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.54□□□□□ -0.72
GdnfP48540 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
GdnfP48540 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
GdnfP48540 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
GdnfP48540 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
GdnfP48540 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
GdnfP48540 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
GdnfP48540 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
GdnfP48540 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
GdnfP48540 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
GdnfP48540 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.53□□□□□ -0.72
GdnfP48540 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
GdnfP48540 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.53□□□□□ -0.72
GdnfP48540 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
GdnfP48540 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
GdnfP48540 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
GdnfP48540 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10.53□□□□□ -0.72
GdnfP48540 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.53□□□□□ -0.72
GdnfP48540 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC10.53□□□□□ -0.72
GdnfP48540 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.53□□□□□ -0.72
GdnfP48540 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.53□□□□□ -0.72
GdnfP48540 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.53□□□□□ -0.72
GdnfP48540 Gm3890-201ENSMUST00000182416 207 ntBASIC10.53□□□□□ -0.72
GdnfP48540 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.53□□□□□ -0.72
GdnfP48540 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC10.53□□□□□ -0.72
GdnfP48540 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC10.53□□□□□ -0.72
GdnfP48540 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC10.53□□□□□ -0.72
GdnfP48540 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
GdnfP48540 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.53□□□□□ -0.72
GdnfP48540 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.53□□□□□ -0.72
GdnfP48540 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
GdnfP48540 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 BC043934-202ENSMUST00000185694 2356 ntBASIC10.53□□□□□ -0.72
GdnfP48540 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
GdnfP48540 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
GdnfP48540 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.53□□□□□ -0.72
GdnfP48540 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
GdnfP48540 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
GdnfP48540 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
GdnfP48540 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
GdnfP48540 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
GdnfP48540 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
GdnfP48540 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
GdnfP48540 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
GdnfP48540 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
GdnfP48540 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
GdnfP48540 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
GdnfP48540 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
GdnfP48540 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.52□□□□□ -0.73
GdnfP48540 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
GdnfP48540 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
GdnfP48540 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
GdnfP48540 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
GdnfP48540 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
GdnfP48540 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
GdnfP48540 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms