Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.55□□□□□ -0.56
Tnfsf4P43488 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.55□□□□□ -0.56
Tnfsf4P43488 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf4P43488 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf4P43488 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf4P43488 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf4P43488 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf4P43488 Gm4986-201ENSMUST00000119731 549 ntBASIC11.54□□□□□ -0.56
Tnfsf4P43488 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.54□□□□□ -0.56
Tnfsf4P43488 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf4P43488 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Tnfsf4P43488 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf4P43488 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf4P43488 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf4P43488 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf4P43488 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf4P43488 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Tnfsf4P43488 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf4P43488 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Tnfsf4P43488 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Tnfsf4P43488 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf4P43488 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf4P43488 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Tnfsf4P43488 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf4P43488 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Tnfsf4P43488 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf4P43488 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf4P43488 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf4P43488 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf4P43488 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.54□□□□□ -0.56
Tnfsf4P43488 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf4P43488 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf4P43488 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.53□□□□□ -0.56
Tnfsf4P43488 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf4P43488 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.53□□□□□ -0.56
Tnfsf4P43488 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.53□□□□□ -0.56
Tnfsf4P43488 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Gm5370-201ENSMUST00000187187 574 ntBASIC11.53□□□□□ -0.56
Tnfsf4P43488 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.53□□□□□ -0.56
Tnfsf4P43488 Gm38158-201ENSMUST00000194617 339 ntBASIC11.53□□□□□ -0.56
Tnfsf4P43488 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf4P43488 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.53□□□□□ -0.56
Tnfsf4P43488 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.53□□□□□ -0.56
Tnfsf4P43488 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf4P43488 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.52□□□□□ -0.56
Tnfsf4P43488 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tnfsf4P43488 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tnfsf4P43488 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Tnfsf4P43488 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.52□□□□□ -0.56
Tnfsf4P43488 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.52□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms