Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp13P33435 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Mmp13P33435 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp13P33435 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Mmp13P33435 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp13P33435 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp13P33435 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.26□□□□□ -0.45
Mmp13P33435 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp13P33435 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Mmp13P33435 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.26□□□□□ -0.45
Mmp13P33435 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.26□□□□□ -0.45
Mmp13P33435 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.26□□□□□ -0.45
Mmp13P33435 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.26□□□□□ -0.45
Mmp13P33435 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.26□□□□□ -0.45
Mmp13P33435 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp13P33435 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.26□□□□□ -0.45
Mmp13P33435 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp13P33435 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp13P33435 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp13P33435 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.26□□□□□ -0.45
Mmp13P33435 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp13P33435 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp13P33435 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp13P33435 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp13P33435 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp13P33435 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Mmp13P33435 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp13P33435 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.26□□□□□ -0.45
Mmp13P33435 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp13P33435 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp13P33435 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp13P33435 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Mmp13P33435 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp13P33435 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Mmp13P33435 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp13P33435 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp13P33435 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp13P33435 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Mmp13P33435 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp13P33435 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp13P33435 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp13P33435 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp13P33435 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp13P33435 Gm24255-201ENSMUST00000104481 128 ntBASIC12.25□□□□□ -0.45
Mmp13P33435 Gm11531-201ENSMUST00000117614 555 ntBASIC12.25□□□□□ -0.45
Mmp13P33435 Gm12036-201ENSMUST00000120008 530 ntBASIC12.25□□□□□ -0.45
Mmp13P33435 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.25□□□□□ -0.45
Mmp13P33435 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp13P33435 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp13P33435 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Mmp13P33435 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Mmp13P33435 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp13P33435 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.25□□□□□ -0.45
Mmp13P33435 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp13P33435 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp13P33435 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp13P33435 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp13P33435 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp13P33435 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp13P33435 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp13P33435 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp13P33435 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp13P33435 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp13P33435 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Mmp13P33435 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp13P33435 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp13P33435 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.25□□□□□ -0.45
Mmp13P33435 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp13P33435 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Mmp13P33435 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp13P33435 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp13P33435 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp13P33435 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp13P33435 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp13P33435 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp13P33435 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Mmp13P33435 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.24□□□□□ -0.45
Mmp13P33435 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp13P33435 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.24□□□□□ -0.45
Mmp13P33435 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.24□□□□□ -0.45
Mmp13P33435 Gm14726-201ENSMUST00000120623 896 ntBASIC12.24□□□□□ -0.45
Mmp13P33435 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp13P33435 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp13P33435 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Mmp13P33435 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp13P33435 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp13P33435 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.24□□□□□ -0.45
Mmp13P33435 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp13P33435 Gm9136-201ENSMUST00000193368 454 ntBASIC12.24□□□□□ -0.45
Mmp13P33435 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.24□□□□□ -0.45
Mmp13P33435 Gm42937-201ENSMUST00000197360 752 ntBASIC12.24□□□□□ -0.45
Mmp13P33435 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Mmp13P33435 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Mmp13P33435 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp13P33435 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.24□□□□□ -0.45
Mmp13P33435 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp13P33435 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp13P33435 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp13P33435 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp13P33435 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms