Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcam1P29533 Gm1840-201ENSMUST00000051687 1432 ntBASIC13.72□□□□□ -0.21
Vcam1P29533 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcam1P29533 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcam1P29533 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Vcam1P29533 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Vcam1P29533 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vcam1P29533 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vcam1P29533 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vcam1P29533 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vcam1P29533 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vcam1P29533 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vcam1P29533 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vcam1P29533 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Vcam1P29533 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vcam1P29533 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vcam1P29533 Gm13384-201ENSMUST00000117166 1344 ntBASIC13.71□□□□□ -0.21
Vcam1P29533 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.71□□□□□ -0.21
Vcam1P29533 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vcam1P29533 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vcam1P29533 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vcam1P29533 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Vcam1P29533 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vcam1P29533 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vcam1P29533 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vcam1P29533 Gm14942-201ENSMUST00000119642 336 ntBASIC13.71□□□□□ -0.21
Vcam1P29533 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vcam1P29533 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vcam1P29533 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC13.71□□□□□ -0.21
Vcam1P29533 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vcam1P29533 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vcam1P29533 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vcam1P29533 Gm38210-201ENSMUST00000191944 809 ntBASIC13.71□□□□□ -0.21
Vcam1P29533 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13.71□□□□□ -0.21
Vcam1P29533 Gm43852-201ENSMUST00000202098 917 ntBASIC13.71□□□□□ -0.21
Vcam1P29533 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC13.71□□□□□ -0.21
Vcam1P29533 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vcam1P29533 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vcam1P29533 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vcam1P29533 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vcam1P29533 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vcam1P29533 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.71□□□□□ -0.21
Vcam1P29533 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Vcam1P29533 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.71□□□□□ -0.22
Vcam1P29533 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vcam1P29533 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Vcam1P29533 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vcam1P29533 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vcam1P29533 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Vcam1P29533 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Vcam1P29533 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Vcam1P29533 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vcam1P29533 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vcam1P29533 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.7□□□□□ -0.22
Vcam1P29533 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vcam1P29533 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vcam1P29533 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vcam1P29533 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vcam1P29533 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vcam1P29533 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Vcam1P29533 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Vcam1P29533 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vcam1P29533 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vcam1P29533 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.7□□□□□ -0.22
Vcam1P29533 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vcam1P29533 Gm23272-201ENSMUST00000104053 129 ntBASIC13.7□□□□□ -0.22
Vcam1P29533 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vcam1P29533 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vcam1P29533 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13.7□□□□□ -0.22
Vcam1P29533 Gm18159-201ENSMUST00000174516 1070 ntBASIC13.7□□□□□ -0.22
Vcam1P29533 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC13.7□□□□□ -0.22
Vcam1P29533 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Vcam1P29533 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Vcam1P29533 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vcam1P29533 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC13.7□□□□□ -0.22
Vcam1P29533 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vcam1P29533 Gm43830-201ENSMUST00000198760 1067 ntBASIC13.7□□□□□ -0.22
Vcam1P29533 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vcam1P29533 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Vcam1P29533 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vcam1P29533 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vcam1P29533 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vcam1P29533 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vcam1P29533 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Vcam1P29533 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vcam1P29533 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.7□□□□□ -0.22
Vcam1P29533 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Vcam1P29533 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcam1P29533 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcam1P29533 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcam1P29533 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcam1P29533 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcam1P29533 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcam1P29533 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcam1P29533 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.69□□□□□ -0.22
Vcam1P29533 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcam1P29533 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcam1P29533 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vcam1P29533 Gm12516-201ENSMUST00000120819 385 ntBASIC13.69□□□□□ -0.22
Vcam1P29533 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms