Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Nfkb1P25799 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nfkb1P25799 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nfkb1P25799 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.34□□□□□ -0.43
Nfkb1P25799 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Nfkb1P25799 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Nfkb1P25799 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Nfkb1P25799 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.43
Nfkb1P25799 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Nfkb1P25799 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nfkb1P25799 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.33□□□□□ -0.44
Nfkb1P25799 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nfkb1P25799 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nfkb1P25799 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Nfkb1P25799 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Nfkb1P25799 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nfkb1P25799 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nfkb1P25799 Gm24891-201ENSMUST00000104391 136 ntBASIC12.33□□□□□ -0.44
Nfkb1P25799 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nfkb1P25799 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Nfkb1P25799 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Nfkb1P25799 Gm14724-201ENSMUST00000118400 537 ntBASIC12.33□□□□□ -0.44
Nfkb1P25799 Gm8566-201ENSMUST00000120174 465 ntBASIC12.33□□□□□ -0.44
Nfkb1P25799 Gm8199-201ENSMUST00000121323 823 ntBASIC12.33□□□□□ -0.44
Nfkb1P25799 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nfkb1P25799 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.33□□□□□ -0.44
Nfkb1P25799 Gm9550-201ENSMUST00000161130 862 ntBASIC12.33□□□□□ -0.44
Nfkb1P25799 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Nfkb1P25799 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.33□□□□□ -0.44
Nfkb1P25799 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.33□□□□□ -0.44
Nfkb1P25799 Gm2965-201ENSMUST00000198365 343 ntBASIC12.33□□□□□ -0.44
Nfkb1P25799 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nfkb1P25799 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.33□□□□□ -0.44
Nfkb1P25799 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.33□□□□□ -0.44
Nfkb1P25799 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.33□□□□□ -0.44
Nfkb1P25799 Gm5705-201ENSMUST00000066241 711 ntBASIC12.33□□□□□ -0.44
Nfkb1P25799 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nfkb1P25799 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nfkb1P25799 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nfkb1P25799 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nfkb1P25799 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.33□□□□□ -0.44
Nfkb1P25799 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Nfkb1P25799 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nfkb1P25799 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nfkb1P25799 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nfkb1P25799 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nfkb1P25799 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nfkb1P25799 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Nfkb1P25799 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nfkb1P25799 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.32□□□□□ -0.44
Nfkb1P25799 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nfkb1P25799 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nfkb1P25799 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nfkb1P25799 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nfkb1P25799 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nfkb1P25799 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nfkb1P25799 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nfkb1P25799 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nfkb1P25799 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nfkb1P25799 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Nfkb1P25799 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.32□□□□□ -0.44
Nfkb1P25799 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.32□□□□□ -0.44
Nfkb1P25799 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.32□□□□□ -0.44
Nfkb1P25799 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.32□□□□□ -0.44
Nfkb1P25799 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.32□□□□□ -0.44
Nfkb1P25799 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.32□□□□□ -0.44
Nfkb1P25799 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nfkb1P25799 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nfkb1P25799 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nfkb1P25799 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nfkb1P25799 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nfkb1P25799 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Nfkb1P25799 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nfkb1P25799 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nfkb1P25799 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nfkb1P25799 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nfkb1P25799 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Nfkb1P25799 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nfkb1P25799 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nfkb1P25799 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nfkb1P25799 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.31□□□□□ -0.44
Nfkb1P25799 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nfkb1P25799 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nfkb1P25799 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nfkb1P25799 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nfkb1P25799 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nfkb1P25799 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nfkb1P25799 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nfkb1P25799 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Nfkb1P25799 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nfkb1P25799 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nfkb1P25799 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nfkb1P25799 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nfkb1P25799 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nfkb1P25799 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.31□□□□□ -0.44
Nfkb1P25799 Gm13461-201ENSMUST00000120980 662 ntBASIC12.31□□□□□ -0.44
Nfkb1P25799 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nfkb1P25799 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nfkb1P25799 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.31□□□□□ -0.44
Nfkb1P25799 Gm18558-201ENSMUST00000186253 1214 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms