Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Gm28071-201ENSMUST00000190355 478 ntBASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Gm37666-201ENSMUST00000194110 866 ntBASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Gm7003-201ENSMUST00000195089 312 ntBASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Gm8956-201ENSMUST00000203939 825 ntBASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 AC106830.1-201ENSMUST00000228032 1003 ntBASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1bP25119 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Gm11439-201ENSMUST00000118598 409 ntBASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Gm15711-201ENSMUST00000118889 535 ntBASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Gm12036-201ENSMUST00000120008 530 ntBASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Gm24990-201ENSMUST00000157406 323 ntBASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Gm27341-201ENSMUST00000183570 106 ntBASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1bP25119 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms