Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb9P20615 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb9P20615 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.45□□□□□ -0.58
Hoxb9P20615 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.45□□□□□ -0.58
Hoxb9P20615 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb9P20615 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb9P20615 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb9P20615 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb9P20615 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.45□□□□□ -0.58
Hoxb9P20615 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb9P20615 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb9P20615 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb9P20615 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb9P20615 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Hoxb9P20615 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb9P20615 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.45□□□□□ -0.58
Hoxb9P20615 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Hoxb9P20615 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb9P20615 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb9P20615 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Hoxb9P20615 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.45□□□□□ -0.58
Hoxb9P20615 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb9P20615 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Hoxb9P20615 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.45□□□□□ -0.58
Hoxb9P20615 Gm19287-201ENSMUST00000203190 358 ntBASIC11.45□□□□□ -0.58
Hoxb9P20615 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.45□□□□□ -0.58
Hoxb9P20615 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Hoxb9P20615 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb9P20615 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb9P20615 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Hoxb9P20615 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb9P20615 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb9P20615 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb9P20615 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Hoxb9P20615 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Hoxb9P20615 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb9P20615 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb9P20615 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.45□□□□□ -0.58
Hoxb9P20615 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.45□□□□□ -0.58
Hoxb9P20615 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb9P20615 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb9P20615 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Hoxb9P20615 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb9P20615 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb9P20615 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb9P20615 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb9P20615 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb9P20615 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb9P20615 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Hoxb9P20615 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb9P20615 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.44□□□□□ -0.58
Hoxb9P20615 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb9P20615 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb9P20615 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Hoxb9P20615 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb9P20615 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.44□□□□□ -0.58
Hoxb9P20615 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb9P20615 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.44□□□□□ -0.58
Hoxb9P20615 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.44□□□□□ -0.58
Hoxb9P20615 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Hoxb9P20615 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.44□□□□□ -0.58
Hoxb9P20615 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb9P20615 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Hoxb9P20615 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Hoxb9P20615 Gm22133-201ENSMUST00000102082 109 ntBASIC11.44□□□□□ -0.58
Hoxb9P20615 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.44□□□□□ -0.58
Hoxb9P20615 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb9P20615 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb9P20615 Gm26361-201ENSMUST00000158868 186 ntBASIC11.44□□□□□ -0.58
Hoxb9P20615 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb9P20615 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Hoxb9P20615 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Hoxb9P20615 Gm38314-201ENSMUST00000195709 625 ntBASIC11.44□□□□□ -0.58
Hoxb9P20615 AY036118-201ENSMUST00000200021 923 ntBASIC11.44□□□□□ -0.58
Hoxb9P20615 Gm17812-201ENSMUST00000204935 318 ntBASIC11.44□□□□□ -0.58
Hoxb9P20615 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb9P20615 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.44□□□□□ -0.58
Hoxb9P20615 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.44□□□□□ -0.58
Hoxb9P20615 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb9P20615 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb9P20615 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb9P20615 Gm5705-201ENSMUST00000066241 711 ntBASIC11.44□□□□□ -0.58
Hoxb9P20615 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb9P20615 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb9P20615 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb9P20615 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb9P20615 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.44□□□□□ -0.58
Hoxb9P20615 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb9P20615 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb9P20615 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.44□□□□□ -0.58
Hoxb9P20615 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb9P20615 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb9P20615 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxb9P20615 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxb9P20615 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxb9P20615 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxb9P20615 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.43□□□□□ -0.58
Hoxb9P20615 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Hoxb9P20615 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxb9P20615 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms