Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm29400-201ENSMUST00000187208 695 ntBASIC10.55□□□□□ -0.72
Ccl3P10855 Gm28662-201ENSMUST00000188446 695 ntBASIC10.55□□□□□ -0.72
Ccl3P10855 Gm28251-201ENSMUST00000188835 695 ntBASIC10.55□□□□□ -0.72
Ccl3P10855 Gm9136-201ENSMUST00000193368 454 ntBASIC10.55□□□□□ -0.72
Ccl3P10855 Gm37318-201ENSMUST00000194325 695 ntBASIC10.55□□□□□ -0.72
Ccl3P10855 Gm38017-201ENSMUST00000194768 695 ntBASIC10.55□□□□□ -0.72
Ccl3P10855 Gm37287-201ENSMUST00000195449 695 ntBASIC10.55□□□□□ -0.72
Ccl3P10855 Gm37793-201ENSMUST00000195548 695 ntBASIC10.55□□□□□ -0.72
Ccl3P10855 Gm44315-201ENSMUST00000203041 219 ntBASIC10.55□□□□□ -0.72
Ccl3P10855 Gm45120-201ENSMUST00000208880 408 ntBASIC10.55□□□□□ -0.72
Ccl3P10855 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC10.55□□□□□ -0.72
Ccl3P10855 AC102368.1-201ENSMUST00000227161 892 ntBASIC10.55□□□□□ -0.72
Ccl3P10855 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Ccl3P10855 Olfr584-201ENSMUST00000098210 964 ntBASIC10.55□□□□□ -0.72
Ccl3P10855 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl3P10855 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl3P10855 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Ccl3P10855 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl3P10855 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.55□□□□□ -0.72
Ccl3P10855 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl3P10855 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Ccl3P10855 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl3P10855 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Ccl3P10855 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl3P10855 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl3P10855 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl3P10855 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Ccl3P10855 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl3P10855 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl3P10855 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Ccl3P10855 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.54□□□□□ -0.72
Ccl3P10855 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl3P10855 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl3P10855 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl3P10855 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.54□□□□□ -0.72
Ccl3P10855 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl3P10855 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl3P10855 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl3P10855 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl3P10855 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.54□□□□□ -0.72
Ccl3P10855 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl3P10855 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10.54□□□□□ -0.72
Ccl3P10855 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl3P10855 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl3P10855 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl3P10855 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Ccl3P10855 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC10.54□□□□□ -0.72
Ccl3P10855 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl3P10855 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.54□□□□□ -0.72
Ccl3P10855 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC10.54□□□□□ -0.72
Ccl3P10855 Gm23218-201ENSMUST00000158124 276 ntBASIC10.54□□□□□ -0.72
Ccl3P10855 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.54□□□□□ -0.72
Ccl3P10855 Gm25951-201ENSMUST00000175330 64 ntBASIC10.54□□□□□ -0.72
Ccl3P10855 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Ccl3P10855 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.54□□□□□ -0.72
Ccl3P10855 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl3P10855 Gm5100-201ENSMUST00000195631 589 ntBASIC10.54□□□□□ -0.72
Ccl3P10855 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC10.54□□□□□ -0.72
Ccl3P10855 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl3P10855 Gm5298-201ENSMUST00000201122 892 ntBASIC10.54□□□□□ -0.72
Ccl3P10855 CT009536.2-201ENSMUST00000225370 665 ntBASIC10.54□□□□□ -0.72
Ccl3P10855 AC136376.2-201ENSMUST00000228819 490 ntBASIC10.54□□□□□ -0.72
Ccl3P10855 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl3P10855 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl3P10855 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Ccl3P10855 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl3P10855 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl3P10855 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC10.54□□□□□ -0.72
Ccl3P10855 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC10.54□□□□□ -0.72
Ccl3P10855 Gm5451-201ENSMUST00000080545 579 ntBASIC10.54□□□□□ -0.72
Ccl3P10855 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl3P10855 Gm23680-201ENSMUST00000083162 164 ntBASIC10.54□□□□□ -0.72
Ccl3P10855 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl3P10855 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl3P10855 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl3P10855 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl3P10855 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl3P10855 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl3P10855 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC10.54□□□□□ -0.72
Ccl3P10855 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl3P10855 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl3P10855 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl3P10855 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl3P10855 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.53□□□□□ -0.72
Ccl3P10855 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl3P10855 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl3P10855 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl3P10855 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl3P10855 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl3P10855 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl3P10855 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Ccl3P10855 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Ccl3P10855 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl3P10855 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl3P10855 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl3P10855 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl3P10855 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.53□□□□□ -0.72
Ccl3P10855 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl3P10855 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl3P10855 Gm23272-201ENSMUST00000104053 129 ntBASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms