Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
ApoeP08226 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.32□□□□□ -0.6
ApoeP08226 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.32□□□□□ -0.6
ApoeP08226 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Gm14247-201ENSMUST00000120950 237 ntBASIC11.32□□□□□ -0.6
ApoeP08226 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.32□□□□□ -0.6
ApoeP08226 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.32□□□□□ -0.6
ApoeP08226 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.32□□□□□ -0.6
ApoeP08226 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.32□□□□□ -0.6
ApoeP08226 Gm42937-201ENSMUST00000197360 752 ntBASIC11.32□□□□□ -0.6
ApoeP08226 Gm43002-201ENSMUST00000200310 155 ntBASIC11.32□□□□□ -0.6
ApoeP08226 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
ApoeP08226 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.32□□□□□ -0.6
ApoeP08226 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
ApoeP08226 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
ApoeP08226 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
ApoeP08226 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
ApoeP08226 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
ApoeP08226 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
ApoeP08226 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.32□□□□□ -0.6
ApoeP08226 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.31□□□□□ -0.6
ApoeP08226 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.31□□□□□ -0.6
ApoeP08226 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.31□□□□□ -0.6
ApoeP08226 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
ApoeP08226 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
ApoeP08226 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.31□□□□□ -0.6
ApoeP08226 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.31□□□□□ -0.6
ApoeP08226 Gm11918-201ENSMUST00000121660 179 ntBASIC11.31□□□□□ -0.6
ApoeP08226 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.31□□□□□ -0.6
ApoeP08226 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.31□□□□□ -0.6
ApoeP08226 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 Gm8515-201ENSMUST00000194852 576 ntBASIC11.31□□□□□ -0.6
ApoeP08226 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.31□□□□□ -0.6
ApoeP08226 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.31□□□□□ -0.6
ApoeP08226 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.31□□□□□ -0.6
ApoeP08226 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
ApoeP08226 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
ApoeP08226 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
ApoeP08226 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.31□□□□□ -0.6
ApoeP08226 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.31□□□□□ -0.6
ApoeP08226 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ApoeP08226 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
ApoeP08226 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms