Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chrna4O70174 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.06□□□□□ -0.48
Chrna4O70174 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chrna4O70174 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chrna4O70174 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.06□□□□□ -0.48
Chrna4O70174 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chrna4O70174 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chrna4O70174 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Chrna4O70174 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chrna4O70174 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.06□□□□□ -0.48
Chrna4O70174 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chrna4O70174 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chrna4O70174 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chrna4O70174 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.06□□□□□ -0.48
Chrna4O70174 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Chrna4O70174 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chrna4O70174 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chrna4O70174 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.06□□□□□ -0.48
Chrna4O70174 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chrna4O70174 Gm17812-201ENSMUST00000204935 318 ntBASIC12.06□□□□□ -0.48
Chrna4O70174 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.06□□□□□ -0.48
Chrna4O70174 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.06□□□□□ -0.48
Chrna4O70174 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.06□□□□□ -0.48
Chrna4O70174 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.06□□□□□ -0.48
Chrna4O70174 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.06□□□□□ -0.48
Chrna4O70174 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Chrna4O70174 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chrna4O70174 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chrna4O70174 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chrna4O70174 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.06□□□□□ -0.48
Chrna4O70174 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chrna4O70174 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chrna4O70174 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chrna4O70174 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chrna4O70174 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chrna4O70174 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chrna4O70174 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chrna4O70174 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chrna4O70174 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chrna4O70174 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chrna4O70174 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chrna4O70174 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Chrna4O70174 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chrna4O70174 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.05□□□□□ -0.48
Chrna4O70174 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chrna4O70174 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.05□□□□□ -0.48
Chrna4O70174 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chrna4O70174 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Chrna4O70174 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chrna4O70174 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.05□□□□□ -0.48
Chrna4O70174 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chrna4O70174 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Chrna4O70174 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.05□□□□□ -0.48
Chrna4O70174 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chrna4O70174 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chrna4O70174 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Chrna4O70174 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chrna4O70174 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chrna4O70174 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
Chrna4O70174 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chrna4O70174 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chrna4O70174 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chrna4O70174 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.05□□□□□ -0.48
Chrna4O70174 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chrna4O70174 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Chrna4O70174 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.05□□□□□ -0.48
Chrna4O70174 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chrna4O70174 Gm13996-201ENSMUST00000118456 430 ntBASIC12.05□□□□□ -0.48
Chrna4O70174 Gm14441-201ENSMUST00000121960 540 ntBASIC12.05□□□□□ -0.48
Chrna4O70174 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.05□□□□□ -0.48
Chrna4O70174 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.05□□□□□ -0.48
Chrna4O70174 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.05□□□□□ -0.48
Chrna4O70174 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chrna4O70174 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chrna4O70174 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Chrna4O70174 Gm8956-201ENSMUST00000203939 825 ntBASIC12.05□□□□□ -0.48
Chrna4O70174 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.05□□□□□ -0.48
Chrna4O70174 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.05□□□□□ -0.48
Chrna4O70174 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.05□□□□□ -0.48
Chrna4O70174 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.05□□□□□ -0.48
Chrna4O70174 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chrna4O70174 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Chrna4O70174 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chrna4O70174 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Chrna4O70174 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chrna4O70174 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Chrna4O70174 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chrna4O70174 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Chrna4O70174 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chrna4O70174 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chrna4O70174 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chrna4O70174 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.05□□□□□ -0.48
Chrna4O70174 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chrna4O70174 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chrna4O70174 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.05□□□□□ -0.48
Chrna4O70174 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chrna4O70174 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chrna4O70174 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chrna4O70174 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.04□□□□□ -0.48
Chrna4O70174 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms