Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ChkaO54804 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ChkaO54804 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ChkaO54804 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
ChkaO54804 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.1□□□□□ -0.47
ChkaO54804 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
ChkaO54804 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ChkaO54804 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ChkaO54804 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ChkaO54804 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
ChkaO54804 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ChkaO54804 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
ChkaO54804 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
ChkaO54804 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
ChkaO54804 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ChkaO54804 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
ChkaO54804 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.1□□□□□ -0.47
ChkaO54804 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ChkaO54804 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
ChkaO54804 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
ChkaO54804 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.09□□□□□ -0.47
ChkaO54804 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
ChkaO54804 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 Gm5419-201ENSMUST00000119301 527 ntBASIC12.09□□□□□ -0.47
ChkaO54804 Gm15610-201ENSMUST00000120584 195 ntBASIC12.09□□□□□ -0.47
ChkaO54804 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.09□□□□□ -0.47
ChkaO54804 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
ChkaO54804 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.09□□□□□ -0.47
ChkaO54804 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.09□□□□□ -0.47
ChkaO54804 Gm37489-201ENSMUST00000191883 159 ntBASIC12.09□□□□□ -0.47
ChkaO54804 Gm6013-201ENSMUST00000212264 699 ntBASIC12.09□□□□□ -0.47
ChkaO54804 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.09□□□□□ -0.47
ChkaO54804 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.09□□□□□ -0.47
ChkaO54804 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.09□□□□□ -0.47
ChkaO54804 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
ChkaO54804 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
ChkaO54804 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.09□□□□□ -0.47
ChkaO54804 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.09□□□□□ -0.47
ChkaO54804 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
ChkaO54804 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
ChkaO54804 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ChkaO54804 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.47
ChkaO54804 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
ChkaO54804 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
ChkaO54804 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
ChkaO54804 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
ChkaO54804 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.08□□□□□ -0.48
ChkaO54804 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ChkaO54804 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
ChkaO54804 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ChkaO54804 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.08□□□□□ -0.48
ChkaO54804 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
ChkaO54804 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ChkaO54804 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ChkaO54804 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
ChkaO54804 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ChkaO54804 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ChkaO54804 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ChkaO54804 Gm13297-201ENSMUST00000120205 934 ntBASIC12.08□□□□□ -0.48
ChkaO54804 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.08□□□□□ -0.48
ChkaO54804 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
ChkaO54804 Gm27516-201ENSMUST00000184237 98 ntBASIC12.08□□□□□ -0.48
ChkaO54804 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.08□□□□□ -0.48
ChkaO54804 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.08□□□□□ -0.48
ChkaO54804 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.08□□□□□ -0.48
ChkaO54804 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ChkaO54804 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ChkaO54804 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.08□□□□□ -0.48
ChkaO54804 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms