Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Polr1aO35134 Gm22846-201ENSMUST00000157706 270 ntBASIC18.08■□□□□ 0.48
Polr1aO35134 Gm23576-201ENSMUST00000179918 110 ntBASIC18.08■□□□□ 0.48
Polr1aO35134 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Polr1aO35134 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Polr1aO35134 Gm2594-201ENSMUST00000214774 742 ntBASIC18.08■□□□□ 0.48
Polr1aO35134 AC122891.1-201ENSMUST00000218671 268 ntBASIC18.08■□□□□ 0.48
Polr1aO35134 Gm7525-201ENSMUST00000219425 454 ntBASIC18.08■□□□□ 0.48
Polr1aO35134 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Polr1aO35134 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Polr1aO35134 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Polr1aO35134 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Polr1aO35134 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC18.08■□□□□ 0.48
Polr1aO35134 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Polr1aO35134 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Polr1aO35134 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
Polr1aO35134 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Polr1aO35134 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC18.08■□□□□ 0.48
Polr1aO35134 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Polr1aO35134 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Polr1aO35134 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Polr1aO35134 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Polr1aO35134 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Polr1aO35134 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Polr1aO35134 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Polr1aO35134 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Polr1aO35134 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Polr1aO35134 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
Polr1aO35134 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC18.07■□□□□ 0.48
Polr1aO35134 Gm8302-201ENSMUST00000119217 852 ntBASIC18.07■□□□□ 0.48
Polr1aO35134 Gm14213-201ENSMUST00000119778 768 ntBASIC18.07■□□□□ 0.48
Polr1aO35134 Gm20414-201ENSMUST00000172918 646 ntBASIC18.07■□□□□ 0.48
Polr1aO35134 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Polr1aO35134 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC18.07■□□□□ 0.48
Polr1aO35134 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC18.07■□□□□ 0.48
Polr1aO35134 Gm43610-201ENSMUST00000199117 365 ntBASIC18.07■□□□□ 0.48
Polr1aO35134 Gm6423-201ENSMUST00000204315 934 ntBASIC18.07■□□□□ 0.48
Polr1aO35134 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Polr1aO35134 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Polr1aO35134 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Polr1aO35134 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Polr1aO35134 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Polr1aO35134 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Polr1aO35134 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Polr1aO35134 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Polr1aO35134 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Polr1aO35134 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Polr1aO35134 Gm5257-201ENSMUST00000121823 790 ntBASIC18.06■□□□□ 0.48
Polr1aO35134 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Polr1aO35134 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Polr1aO35134 Gm44216-201ENSMUST00000203942 157 ntBASIC18.06■□□□□ 0.48
Polr1aO35134 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC18.06■□□□□ 0.48
Polr1aO35134 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Polr1aO35134 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Polr1aO35134 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Polr1aO35134 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Polr1aO35134 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC18.06■□□□□ 0.48
Polr1aO35134 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Polr1aO35134 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Polr1aO35134 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Polr1aO35134 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Polr1aO35134 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Polr1aO35134 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Polr1aO35134 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Polr1aO35134 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Polr1aO35134 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Polr1aO35134 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Polr1aO35134 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Polr1aO35134 Gm17214-201ENSMUST00000164501 541 ntBASIC18.06■□□□□ 0.48
Polr1aO35134 Gm8451-201ENSMUST00000170338 447 ntBASIC18.06■□□□□ 0.48
Polr1aO35134 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Polr1aO35134 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Polr1aO35134 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC18.06■□□□□ 0.48
Polr1aO35134 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Polr1aO35134 Gm7536-201ENSMUST00000077389 444 ntBASIC18.06■□□□□ 0.48
Polr1aO35134 Gm5453-201ENSMUST00000080866 447 ntBASIC18.06■□□□□ 0.48
Polr1aO35134 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Polr1aO35134 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Polr1aO35134 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Polr1aO35134 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Polr1aO35134 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC18.05■□□□□ 0.48
Polr1aO35134 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Polr1aO35134 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Polr1aO35134 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Polr1aO35134 Gm44106-201ENSMUST00000203153 1599 ntBASIC18.05■□□□□ 0.48
Polr1aO35134 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Polr1aO35134 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Polr1aO35134 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Polr1aO35134 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC18.05■□□□□ 0.48
Polr1aO35134 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Polr1aO35134 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Polr1aO35134 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Polr1aO35134 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC18.05■□□□□ 0.48
Polr1aO35134 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Polr1aO35134 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Polr1aO35134 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC18.05■□□□□ 0.48
Polr1aO35134 Gm7719-201ENSMUST00000182374 975 ntBASIC18.05■□□□□ 0.48
Polr1aO35134 Mir6923-201ENSMUST00000184592 72 ntBASIC18.05■□□□□ 0.48
Polr1aO35134 Gm6855-201ENSMUST00000206307 790 ntBASIC18.05■□□□□ 0.48
Polr1aO35134 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms