Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC12.94□□□□□ -0.34
Usp35M0QWN7 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.94□□□□□ -0.34
Usp35M0QWN7 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp35M0QWN7 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.94□□□□□ -0.34
Usp35M0QWN7 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.93□□□□□ -0.34
Usp35M0QWN7 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp35M0QWN7 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp35M0QWN7 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Usp35M0QWN7 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp35M0QWN7 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp35M0QWN7 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp35M0QWN7 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp35M0QWN7 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp35M0QWN7 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Usp35M0QWN7 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp35M0QWN7 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp35M0QWN7 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp35M0QWN7 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.93□□□□□ -0.34
Usp35M0QWN7 Gm12266-201ENSMUST00000120311 962 ntBASIC12.93□□□□□ -0.34
Usp35M0QWN7 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.93□□□□□ -0.34
Usp35M0QWN7 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp35M0QWN7 Gm5523-201ENSMUST00000180415 997 ntBASIC12.93□□□□□ -0.34
Usp35M0QWN7 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Usp35M0QWN7 Mir7032-201ENSMUST00000185154 79 ntBASIC12.93□□□□□ -0.34
Usp35M0QWN7 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.93□□□□□ -0.34
Usp35M0QWN7 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.93□□□□□ -0.34
Usp35M0QWN7 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp35M0QWN7 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp35M0QWN7 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.93□□□□□ -0.34
Usp35M0QWN7 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp35M0QWN7 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp35M0QWN7 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp35M0QWN7 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp35M0QWN7 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Usp35M0QWN7 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp35M0QWN7 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp35M0QWN7 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp35M0QWN7 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp35M0QWN7 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp35M0QWN7 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp35M0QWN7 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.92□□□□□ -0.34
Usp35M0QWN7 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Usp35M0QWN7 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp35M0QWN7 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp35M0QWN7 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp35M0QWN7 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.92□□□□□ -0.34
Usp35M0QWN7 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Usp35M0QWN7 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp35M0QWN7 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp35M0QWN7 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp35M0QWN7 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp35M0QWN7 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp35M0QWN7 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp35M0QWN7 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.92□□□□□ -0.34
Usp35M0QWN7 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.92□□□□□ -0.34
Usp35M0QWN7 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.92□□□□□ -0.34
Usp35M0QWN7 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.92□□□□□ -0.34
Usp35M0QWN7 Gm17040-202ENSMUST00000170597 889 ntBASIC12.92□□□□□ -0.34
Usp35M0QWN7 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Usp35M0QWN7 Gm37666-201ENSMUST00000194110 866 ntBASIC12.92□□□□□ -0.34
Usp35M0QWN7 Gm42937-201ENSMUST00000197360 752 ntBASIC12.92□□□□□ -0.34
Usp35M0QWN7 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.92□□□□□ -0.34
Usp35M0QWN7 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp35M0QWN7 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp35M0QWN7 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp35M0QWN7 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp35M0QWN7 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp35M0QWN7 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.92□□□□□ -0.34
Usp35M0QWN7 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp35M0QWN7 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp35M0QWN7 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp35M0QWN7 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Usp35M0QWN7 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp35M0QWN7 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp35M0QWN7 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp35M0QWN7 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.92□□□□□ -0.34
Usp35M0QWN7 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp35M0QWN7 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Usp35M0QWN7 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Usp35M0QWN7 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp35M0QWN7 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp35M0QWN7 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp35M0QWN7 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp35M0QWN7 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Usp35M0QWN7 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Usp35M0QWN7 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp35M0QWN7 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Usp35M0QWN7 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp35M0QWN7 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp35M0QWN7 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp35M0QWN7 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
Usp35M0QWN7 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp35M0QWN7 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp35M0QWN7 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Usp35M0QWN7 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp35M0QWN7 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.91□□□□□ -0.34
Usp35M0QWN7 Gm27552-201ENSMUST00000183351 62 ntBASIC12.91□□□□□ -0.34
Usp35M0QWN7 Gm27844-201ENSMUST00000183613 62 ntBASIC12.91□□□□□ -0.34
Usp35M0QWN7 Gm29615-201ENSMUST00000185371 697 ntBASIC12.91□□□□□ -0.34
Usp35M0QWN7 Gm28224-201ENSMUST00000186078 697 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms