Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc188F6WEU2 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc188F6WEU2 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc188F6WEU2 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc188F6WEU2 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc188F6WEU2 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Ccdc188F6WEU2 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc188F6WEU2 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc188F6WEU2 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc188F6WEU2 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc188F6WEU2 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc188F6WEU2 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc188F6WEU2 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc188F6WEU2 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Gm15626-201ENSMUST00000117478 868 ntBASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Gm27826-201ENSMUST00000175282 255 ntBASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Gm7741-201ENSMUST00000181445 989 ntBASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Gm6216-201ENSMUST00000182390 687 ntBASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Gm6518-201ENSMUST00000208450 342 ntBASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Gm6478-201ENSMUST00000099450 742 ntBASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Gm42970-201ENSMUST00000196407 1352 ntBASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.03□□□□□ -0.48
Ccdc188F6WEU2 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.02□□□□□ -0.48
Ccdc188F6WEU2 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc188F6WEU2 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Ccdc188F6WEU2 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc188F6WEU2 Gm7701-201ENSMUST00000163185 1479 ntBASIC12.02□□□□□ -0.48
Ccdc188F6WEU2 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc188F6WEU2 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc188F6WEU2 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc188F6WEU2 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.48
Ccdc188F6WEU2 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc188F6WEU2 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc188F6WEU2 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc188F6WEU2 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.02□□□□□ -0.49
Ccdc188F6WEU2 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.02□□□□□ -0.49
Ccdc188F6WEU2 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc188F6WEU2 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc188F6WEU2 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc188F6WEU2 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc188F6WEU2 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc188F6WEU2 Gm11540-201ENSMUST00000117457 780 ntBASIC12.02□□□□□ -0.49
Ccdc188F6WEU2 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc188F6WEU2 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc188F6WEU2 Kif4-ps-202ENSMUST00000185083 652 ntBASIC12.02□□□□□ -0.49
Ccdc188F6WEU2 Gm38103-201ENSMUST00000191707 864 ntBASIC12.02□□□□□ -0.49
Ccdc188F6WEU2 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC12.02□□□□□ -0.49
Ccdc188F6WEU2 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC12.02□□□□□ -0.49
Ccdc188F6WEU2 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc188F6WEU2 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC12.02□□□□□ -0.49
Ccdc188F6WEU2 Gm8255-201ENSMUST00000218693 305 ntBASIC12.02□□□□□ -0.49
Ccdc188F6WEU2 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc188F6WEU2 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc188F6WEU2 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ccdc188F6WEU2 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ccdc188F6WEU2 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc188F6WEU2 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ccdc188F6WEU2 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.02□□□□□ -0.49
Ccdc188F6WEU2 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms