Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scaf11E9PZM7 Rnf17-202ENSMUST00000223627 2077 ntBASIC16.48■□□□□ 0.23
Scaf11E9PZM7 Smok4a-201ENSMUST00000074512 1455 ntBASIC16.48■□□□□ 0.23
Scaf11E9PZM7 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Scaf11E9PZM7 Gm14497-201ENSMUST00000119537 580 ntBASIC16.48■□□□□ 0.23
Scaf11E9PZM7 Gm12461-201ENSMUST00000120231 1239 ntBASIC16.48■□□□□ 0.23
Scaf11E9PZM7 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC16.48■□□□□ 0.23
Scaf11E9PZM7 Gm9630-201ENSMUST00000178304 885 ntBASIC16.48■□□□□ 0.23
Scaf11E9PZM7 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Scaf11E9PZM7 Gm37452-201ENSMUST00000194416 1160 ntBASIC16.48■□□□□ 0.23
Scaf11E9PZM7 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC16.48■□□□□ 0.23
Scaf11E9PZM7 AC164437.3-201ENSMUST00000228323 347 ntBASIC16.48■□□□□ 0.23
Scaf11E9PZM7 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scaf11E9PZM7 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scaf11E9PZM7 Gm9791-201ENSMUST00000060997 447 ntBASIC16.48■□□□□ 0.23
Scaf11E9PZM7 Gm6564-201ENSMUST00000075377 619 ntBASIC16.48■□□□□ 0.23
Scaf11E9PZM7 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scaf11E9PZM7 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scaf11E9PZM7 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scaf11E9PZM7 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scaf11E9PZM7 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scaf11E9PZM7 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Scaf11E9PZM7 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scaf11E9PZM7 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scaf11E9PZM7 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Scaf11E9PZM7 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scaf11E9PZM7 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Scaf11E9PZM7 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC16.47■□□□□ 0.23
Scaf11E9PZM7 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scaf11E9PZM7 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scaf11E9PZM7 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scaf11E9PZM7 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scaf11E9PZM7 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scaf11E9PZM7 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scaf11E9PZM7 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scaf11E9PZM7 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scaf11E9PZM7 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC16.47■□□□□ 0.23
Scaf11E9PZM7 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scaf11E9PZM7 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC16.47■□□□□ 0.23
Scaf11E9PZM7 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scaf11E9PZM7 Gm7741-201ENSMUST00000181445 989 ntBASIC16.47■□□□□ 0.23
Scaf11E9PZM7 Gm5267-201ENSMUST00000191574 1045 ntBASIC16.47■□□□□ 0.23
Scaf11E9PZM7 Gm37365-201ENSMUST00000193109 409 ntBASIC16.47■□□□□ 0.23
Scaf11E9PZM7 Gm6606-201ENSMUST00000193613 947 ntBASIC16.47■□□□□ 0.23
Scaf11E9PZM7 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scaf11E9PZM7 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scaf11E9PZM7 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scaf11E9PZM7 Gm7525-201ENSMUST00000219425 454 ntBASIC16.47■□□□□ 0.23
Scaf11E9PZM7 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC16.47■□□□□ 0.23
Scaf11E9PZM7 AC154436.1-201ENSMUST00000227272 782 ntBASIC16.47■□□□□ 0.23
Scaf11E9PZM7 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scaf11E9PZM7 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scaf11E9PZM7 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scaf11E9PZM7 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Scaf11E9PZM7 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scaf11E9PZM7 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scaf11E9PZM7 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scaf11E9PZM7 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Scaf11E9PZM7 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Scaf11E9PZM7 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC16.46■□□□□ 0.23
Scaf11E9PZM7 Gm43364-201ENSMUST00000196046 3274 ntBASIC16.46■□□□□ 0.23
Scaf11E9PZM7 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scaf11E9PZM7 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scaf11E9PZM7 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scaf11E9PZM7 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scaf11E9PZM7 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scaf11E9PZM7 Gm6189-201ENSMUST00000164487 2082 ntBASIC16.46■□□□□ 0.23
Scaf11E9PZM7 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scaf11E9PZM7 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scaf11E9PZM7 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Scaf11E9PZM7 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Scaf11E9PZM7 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scaf11E9PZM7 Gm25492-201ENSMUST00000157383 129 ntBASIC16.46■□□□□ 0.23
Scaf11E9PZM7 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scaf11E9PZM7 Gm43547-201ENSMUST00000197729 328 ntBASIC16.46■□□□□ 0.23
Scaf11E9PZM7 Gm9487-201ENSMUST00000216600 472 ntBASIC16.46■□□□□ 0.23
Scaf11E9PZM7 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC16.46■□□□□ 0.23
Scaf11E9PZM7 AC154305.2-201ENSMUST00000225813 901 ntBASIC16.46■□□□□ 0.23
Scaf11E9PZM7 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scaf11E9PZM7 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scaf11E9PZM7 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Scaf11E9PZM7 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scaf11E9PZM7 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Scaf11E9PZM7 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Scaf11E9PZM7 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC16.46■□□□□ 0.22
Scaf11E9PZM7 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scaf11E9PZM7 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Scaf11E9PZM7 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Scaf11E9PZM7 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC16.45■□□□□ 0.22
Scaf11E9PZM7 Gm26616-202ENSMUST00000195676 3107 ntBASIC16.45■□□□□ 0.22
Scaf11E9PZM7 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Scaf11E9PZM7 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC16.45■□□□□ 0.22
Scaf11E9PZM7 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Scaf11E9PZM7 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Scaf11E9PZM7 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC16.45■□□□□ 0.22
Scaf11E9PZM7 Gm4034-201ENSMUST00000187674 480 ntBASIC16.45■□□□□ 0.22
Scaf11E9PZM7 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC16.45■□□□□ 0.22
Scaf11E9PZM7 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Scaf11E9PZM7 AC154759.1-201ENSMUST00000224137 1159 ntBASIC16.45■□□□□ 0.22
Scaf11E9PZM7 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms