Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Srp54bE9PXC0 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.51
Srp54bE9PXC0 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Srp54bE9PXC0 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Srp54bE9PXC0 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Gm15610-201ENSMUST00000120584 195 ntBASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Mir7686-201ENSMUST00000200604 57 ntBASIC11.83□□□□□ -0.52
Srp54bE9PXC0 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Gm44126-201ENSMUST00000204831 514 ntBASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Gm43916-201ENSMUST00000205062 967 ntBASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.83□□□□□ -0.52
Srp54bE9PXC0 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Srp54bE9PXC0 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms