Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm5340-201ENSMUST00000203733 880 ntBASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Gm45085-201ENSMUST00000209100 441 ntBASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Gm18035-201ENSMUST00000211962 589 ntBASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Gm9487-201ENSMUST00000216600 472 ntBASIC12.07□□□□□ -0.48
Col4a6B1AVK5 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Gm15197-201ENSMUST00000120526 478 ntBASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Gm14993-201ENSMUST00000121180 164 ntBASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Mir6941-201ENSMUST00000184711 59 ntBASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Gm18801-201ENSMUST00000186616 536 ntBASIC12.06□□□□□ -0.48
Col4a6B1AVK5 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Gm18065-201ENSMUST00000221395 526 ntBASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Gm14005-208ENSMUST00000223654 681 ntBASIC12.06□□□□□ -0.48
Col4a6B1AVK5 AC158388.3-202ENSMUST00000225517 775 ntBASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Gm26670-202ENSMUST00000226862 340 ntBASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Gm3828-201ENSMUST00000121817 257 ntBASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Gm15620-201ENSMUST00000122949 270 ntBASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Gm4982-201ENSMUST00000160440 1098 ntBASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Gm27390-201ENSMUST00000184516 176 ntBASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Mir7035-201ENSMUST00000184713 82 ntBASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Gm42599-201ENSMUST00000201308 469 ntBASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Gm2594-201ENSMUST00000214774 742 ntBASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Gm8181-201ENSMUST00000062242 669 ntBASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a6B1AVK5 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms