Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
AmfrQ9R049 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.42□□□□□ -0.26
AmfrQ9R049 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AmfrQ9R049 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.42□□□□□ -0.26
AmfrQ9R049 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AmfrQ9R049 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
AmfrQ9R049 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
AmfrQ9R049 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.42□□□□□ -0.26
AmfrQ9R049 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.42□□□□□ -0.26
AmfrQ9R049 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.42□□□□□ -0.26
AmfrQ9R049 Gm27046-201ENSMUST00000182160 463 ntBASIC13.42□□□□□ -0.26
AmfrQ9R049 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.42□□□□□ -0.26
AmfrQ9R049 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AmfrQ9R049 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AmfrQ9R049 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.42□□□□□ -0.26
AmfrQ9R049 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.42□□□□□ -0.26
AmfrQ9R049 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.42□□□□□ -0.26
AmfrQ9R049 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.42□□□□□ -0.26
AmfrQ9R049 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.42□□□□□ -0.26
AmfrQ9R049 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
AmfrQ9R049 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
AmfrQ9R049 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
AmfrQ9R049 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
AmfrQ9R049 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
AmfrQ9R049 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
AmfrQ9R049 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
AmfrQ9R049 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
AmfrQ9R049 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AmfrQ9R049 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AmfrQ9R049 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AmfrQ9R049 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AmfrQ9R049 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
AmfrQ9R049 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
AmfrQ9R049 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AmfrQ9R049 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AmfrQ9R049 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AmfrQ9R049 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
AmfrQ9R049 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
AmfrQ9R049 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AmfrQ9R049 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
AmfrQ9R049 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AmfrQ9R049 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AmfrQ9R049 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AmfrQ9R049 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.41□□□□□ -0.26
AmfrQ9R049 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.41□□□□□ -0.26
AmfrQ9R049 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
AmfrQ9R049 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AmfrQ9R049 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.41□□□□□ -0.26
AmfrQ9R049 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AmfrQ9R049 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
AmfrQ9R049 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AmfrQ9R049 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
AmfrQ9R049 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
AmfrQ9R049 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AmfrQ9R049 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.41□□□□□ -0.26
AmfrQ9R049 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.41□□□□□ -0.26
AmfrQ9R049 Gm45186-201ENSMUST00000206874 478 ntBASIC13.41□□□□□ -0.26
AmfrQ9R049 Gm18056-201ENSMUST00000207670 568 ntBASIC13.41□□□□□ -0.26
AmfrQ9R049 Gm18061-201ENSMUST00000208350 562 ntBASIC13.41□□□□□ -0.26
AmfrQ9R049 Gm18063-201ENSMUST00000208529 568 ntBASIC13.41□□□□□ -0.26
AmfrQ9R049 Gm18052-201ENSMUST00000208750 559 ntBASIC13.41□□□□□ -0.26
AmfrQ9R049 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AmfrQ9R049 Gm10312-201ENSMUST00000078515 489 ntBASIC13.41□□□□□ -0.26
AmfrQ9R049 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
AmfrQ9R049 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.41□□□□□ -0.26
AmfrQ9R049 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
AmfrQ9R049 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
AmfrQ9R049 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AmfrQ9R049 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AmfrQ9R049 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AmfrQ9R049 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AmfrQ9R049 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.41□□□□□ -0.26
AmfrQ9R049 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
AmfrQ9R049 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
AmfrQ9R049 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AmfrQ9R049 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AmfrQ9R049 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AmfrQ9R049 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
AmfrQ9R049 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AmfrQ9R049 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.4□□□□□ -0.26
AmfrQ9R049 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.4□□□□□ -0.26
AmfrQ9R049 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AmfrQ9R049 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
AmfrQ9R049 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AmfrQ9R049 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
AmfrQ9R049 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.4□□□□□ -0.26
AmfrQ9R049 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
AmfrQ9R049 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.4□□□□□ -0.26
AmfrQ9R049 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
AmfrQ9R049 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AmfrQ9R049 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AmfrQ9R049 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
AmfrQ9R049 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AmfrQ9R049 Gm6963-201ENSMUST00000147879 379 ntBASIC13.4□□□□□ -0.26
AmfrQ9R049 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AmfrQ9R049 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
AmfrQ9R049 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
AmfrQ9R049 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.4□□□□□ -0.26
AmfrQ9R049 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.4□□□□□ -0.26
AmfrQ9R049 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms