Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Gm6397-201ENSMUST00000161973 1069 ntBASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Gm7430-201ENSMUST00000193824 1144 ntBASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Gm37436-201ENSMUST00000193842 1085 ntBASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Ginm1-202ENSMUST00000065124 300 ntBASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Gm7551-201ENSMUST00000089593 1074 ntBASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3bQ9ES34 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Gm15595-201ENSMUST00000120840 961 ntBASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Gm8546-201ENSMUST00000178288 1264 ntBASIC14.25□□□□□ -0.13
Ube3bQ9ES34 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Gm18351-201ENSMUST00000188646 883 ntBASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Gm37835-201ENSMUST00000193305 361 ntBASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Gm45909-201ENSMUST00000212413 1031 ntBASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3bQ9ES34 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3bQ9ES34 AC138329.2-201ENSMUST00000225579 1842 ntBASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3bQ9ES34 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 AC108858.2-201ENSMUST00000228186 1425 ntBASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Gm45428-201ENSMUST00000209619 1789 ntBASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Gm13611-201ENSMUST00000118269 318 ntBASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Gm42997-202ENSMUST00000200321 985 ntBASIC14.24□□□□□ -0.13
Ube3bQ9ES34 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC14.24□□□□□ -0.13
Ube3bQ9ES34 CT009713.8-202ENSMUST00000224732 385 ntBASIC14.24□□□□□ -0.13
Ube3bQ9ES34 AC134860.1-201ENSMUST00000224867 660 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms