Protein–RNA interactions for Protein: Q9D7U6

Cldn22, Claudin-22, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn22Q9D7U6 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cldn22Q9D7U6 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cldn22Q9D7U6 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn22Q9D7U6 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn22Q9D7U6 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn22Q9D7U6 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cldn22Q9D7U6 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cldn22Q9D7U6 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn22Q9D7U6 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn22Q9D7U6 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Cldn22Q9D7U6 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.08□□□□□ -0.48
Cldn22Q9D7U6 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.08□□□□□ -0.48
Cldn22Q9D7U6 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Cldn22Q9D7U6 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn22Q9D7U6 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cldn22Q9D7U6 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn22Q9D7U6 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn22Q9D7U6 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cldn22Q9D7U6 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn22Q9D7U6 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.08□□□□□ -0.48
Cldn22Q9D7U6 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn22Q9D7U6 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn22Q9D7U6 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn22Q9D7U6 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn22Q9D7U6 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn22Q9D7U6 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn22Q9D7U6 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn22Q9D7U6 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn22Q9D7U6 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn22Q9D7U6 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cldn22Q9D7U6 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.08□□□□□ -0.48
Cldn22Q9D7U6 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.08□□□□□ -0.48
Cldn22Q9D7U6 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.08□□□□□ -0.48
Cldn22Q9D7U6 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Gm6963-201ENSMUST00000147879 379 ntBASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Gm9022-201ENSMUST00000182482 992 ntBASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Gm8385-201ENSMUST00000058999 643 ntBASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn22Q9D7U6 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn22Q9D7U6 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn22Q9D7U6 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cldn22Q9D7U6 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.06□□□□□ -0.48
Cldn22Q9D7U6 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.06□□□□□ -0.48
Cldn22Q9D7U6 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn22Q9D7U6 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cldn22Q9D7U6 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cldn22Q9D7U6 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.06□□□□□ -0.48
Cldn22Q9D7U6 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn22Q9D7U6 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.06□□□□□ -0.48
Cldn22Q9D7U6 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.06□□□□□ -0.48
Cldn22Q9D7U6 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms