Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Gm13612-201ENSMUST00000119276 390 ntBASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.04□□□□□ -0.48
Trim42Q9D2H5 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Gm44855-201ENSMUST00000205725 362 ntBASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Gm4768-201ENSMUST00000206199 686 ntBASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Gm6007-201ENSMUST00000208170 823 ntBASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Gm9466-201ENSMUST00000218144 2246 ntBASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim42Q9D2H5 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Gm12036-201ENSMUST00000120008 530 ntBASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Gm10156-201ENSMUST00000122364 462 ntBASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Gm5866-201ENSMUST00000177881 973 ntBASIC12.03□□□□□ -0.48
Trim42Q9D2H5 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Gm2495-201ENSMUST00000191160 466 ntBASIC12.03□□□□□ -0.48
Trim42Q9D2H5 Gm37917-201ENSMUST00000194711 392 ntBASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms