Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Mir1894-201ENSMUST00000122802 81 ntBASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Gm44405-201ENSMUST00000198952 126 ntBASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Gm6745-201ENSMUST00000199216 526 ntBASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 BC043934-202ENSMUST00000185694 2356 ntBASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chaf1bQ9D0N7 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Gm24830-201ENSMUST00000102024 166 ntBASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Gm24644-201ENSMUST00000157114 139 ntBASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Gm26232-201ENSMUST00000083360 166 ntBASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms