Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12□□□□□ -0.49
Trim33Q99PP7 Gm43377-201ENSMUST00000201640 455 ntBASIC12□□□□□ -0.49
Trim33Q99PP7 Gm45484-201ENSMUST00000210310 1141 ntBASIC12□□□□□ -0.49
Trim33Q99PP7 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12□□□□□ -0.49
Trim33Q99PP7 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12□□□□□ -0.49
Trim33Q99PP7 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim33Q99PP7 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim33Q99PP7 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim33Q99PP7 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trim33Q99PP7 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trim33Q99PP7 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trim33Q99PP7 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim33Q99PP7 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trim33Q99PP7 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim33Q99PP7 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim33Q99PP7 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim33Q99PP7 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim33Q99PP7 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim33Q99PP7 Gm44863-201ENSMUST00000207613 1422 ntBASIC12□□□□□ -0.49
Trim33Q99PP7 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trim33Q99PP7 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim33Q99PP7 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trim33Q99PP7 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC12□□□□□ -0.49
Trim33Q99PP7 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim33Q99PP7 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim33Q99PP7 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim33Q99PP7 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Trim33Q99PP7 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12□□□□□ -0.49
Trim33Q99PP7 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trim33Q99PP7 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim33Q99PP7 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim33Q99PP7 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Gm22323-201ENSMUST00000103832 109 ntBASIC11.99□□□□□ -0.49
Trim33Q99PP7 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Gm11930-201ENSMUST00000117788 190 ntBASIC11.99□□□□□ -0.49
Trim33Q99PP7 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.99□□□□□ -0.49
Trim33Q99PP7 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Trim33Q99PP7 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim33Q99PP7 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Gm20482-202ENSMUST00000174729 825 ntBASIC11.99□□□□□ -0.49
Trim33Q99PP7 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.99□□□□□ -0.49
Trim33Q99PP7 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.99□□□□□ -0.49
Trim33Q99PP7 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.99□□□□□ -0.49
Trim33Q99PP7 AC154806.5-202ENSMUST00000227217 1443 ntBASIC11.99□□□□□ -0.49
Trim33Q99PP7 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.99□□□□□ -0.49
Trim33Q99PP7 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Trim33Q99PP7 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim33Q99PP7 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim33Q99PP7 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim33Q99PP7 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim33Q99PP7 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim33Q99PP7 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim33Q99PP7 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim33Q99PP7 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.98□□□□□ -0.49
Trim33Q99PP7 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim33Q99PP7 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.98□□□□□ -0.49
Trim33Q99PP7 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim33Q99PP7 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.98□□□□□ -0.49
Trim33Q99PP7 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim33Q99PP7 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim33Q99PP7 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim33Q99PP7 Gm27046-201ENSMUST00000182160 463 ntBASIC11.98□□□□□ -0.49
Trim33Q99PP7 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.98□□□□□ -0.49
Trim33Q99PP7 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim33Q99PP7 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim33Q99PP7 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms