Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp11Q99K46 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp11Q99K46 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Usp11Q99K46 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.65□□□□□ -0.38
Usp11Q99K46 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp11Q99K46 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Usp11Q99K46 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.65□□□□□ -0.38
Usp11Q99K46 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Usp11Q99K46 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Usp11Q99K46 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp11Q99K46 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp11Q99K46 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Usp11Q99K46 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp11Q99K46 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp11Q99K46 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp11Q99K46 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp11Q99K46 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.65□□□□□ -0.38
Usp11Q99K46 Gm14726-201ENSMUST00000120623 896 ntBASIC12.65□□□□□ -0.38
Usp11Q99K46 Gm13570-201ENSMUST00000140763 309 ntBASIC12.65□□□□□ -0.38
Usp11Q99K46 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Usp11Q99K46 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Usp11Q99K46 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Usp11Q99K46 Gm9022-201ENSMUST00000182482 992 ntBASIC12.65□□□□□ -0.38
Usp11Q99K46 Gm27243-201ENSMUST00000183964 521 ntBASIC12.65□□□□□ -0.38
Usp11Q99K46 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Usp11Q99K46 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.65□□□□□ -0.38
Usp11Q99K46 Gm7783-201ENSMUST00000204795 781 ntBASIC12.65□□□□□ -0.38
Usp11Q99K46 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp11Q99K46 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.65□□□□□ -0.38
Usp11Q99K46 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp11Q99K46 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp11Q99K46 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.65□□□□□ -0.38
Usp11Q99K46 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp11Q99K46 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Usp11Q99K46 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Usp11Q99K46 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.65□□□□□ -0.38
Usp11Q99K46 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Usp11Q99K46 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp11Q99K46 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Usp11Q99K46 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp11Q99K46 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Usp11Q99K46 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp11Q99K46 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.65□□□□□ -0.38
Usp11Q99K46 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp11Q99K46 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.65□□□□□ -0.38
Usp11Q99K46 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp11Q99K46 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.65□□□□□ -0.38
Usp11Q99K46 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Usp11Q99K46 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Usp11Q99K46 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Usp11Q99K46 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.65□□□□□ -0.39
Usp11Q99K46 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Usp11Q99K46 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Usp11Q99K46 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Usp11Q99K46 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.39
Usp11Q99K46 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Usp11Q99K46 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.64□□□□□ -0.39
Usp11Q99K46 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.64□□□□□ -0.39
Usp11Q99K46 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Usp11Q99K46 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.64□□□□□ -0.39
Usp11Q99K46 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Gm24255-201ENSMUST00000104481 128 ntBASIC12.64□□□□□ -0.39
Usp11Q99K46 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.64□□□□□ -0.39
Usp11Q99K46 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Usp11Q99K46 Gm18304-201ENSMUST00000189162 546 ntBASIC12.64□□□□□ -0.39
Usp11Q99K46 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.64□□□□□ -0.39
Usp11Q99K46 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Usp11Q99K46 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Usp11Q99K46 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.64□□□□□ -0.39
Usp11Q99K46 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp11Q99K46 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms