Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.09□□□□□ -0.47
Cdk9Q99J95 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk9Q99J95 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Cdk9Q99J95 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Cdk9Q99J95 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.08□□□□□ -0.47
Cdk9Q99J95 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Cdk9Q99J95 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cdk9Q99J95 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.08□□□□□ -0.48
Cdk9Q99J95 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cdk9Q99J95 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.08□□□□□ -0.48
Cdk9Q99J95 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk9Q99J95 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Gm12390-201ENSMUST00000117897 397 ntBASIC12.08□□□□□ -0.48
Cdk9Q99J95 Gm12203-201ENSMUST00000118235 598 ntBASIC12.08□□□□□ -0.48
Cdk9Q99J95 Gm12209-201ENSMUST00000120089 596 ntBASIC12.08□□□□□ -0.48
Cdk9Q99J95 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Gm27847-201ENSMUST00000183711 107 ntBASIC12.08□□□□□ -0.48
Cdk9Q99J95 Gm27375-201ENSMUST00000183799 107 ntBASIC12.08□□□□□ -0.48
Cdk9Q99J95 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Gm38092-201ENSMUST00000195600 653 ntBASIC12.08□□□□□ -0.48
Cdk9Q99J95 Gm18062-201ENSMUST00000208020 547 ntBASIC12.08□□□□□ -0.48
Cdk9Q99J95 Gm18055-201ENSMUST00000208254 547 ntBASIC12.08□□□□□ -0.48
Cdk9Q99J95 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Gm10012-201ENSMUST00000078252 192 ntBASIC12.08□□□□□ -0.48
Cdk9Q99J95 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk9Q99J95 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk9Q99J95 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk9Q99J95 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Gm24196-201ENSMUST00000179161 110 ntBASIC12.07□□□□□ -0.48
Cdk9Q99J95 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Cdk9Q99J95 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk9Q99J95 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Gm19163-201ENSMUST00000223313 780 ntBASIC12.07□□□□□ -0.48
Cdk9Q99J95 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.07□□□□□ -0.48
Cdk9Q99J95 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Gm10146-201ENSMUST00000072739 309 ntBASIC12.07□□□□□ -0.48
Cdk9Q99J95 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk9Q99J95 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms