Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Gm23270-201ENSMUST00000104055 131 ntBASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Gm45865-201ENSMUST00000211815 945 ntBASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Gm11930-201ENSMUST00000117788 190 ntBASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Gm3961-201ENSMUST00000204425 994 ntBASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.69□□□□□ -0.54
Pcdha8Q91Y12 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Rprl1-201ENSMUST00000158050 327 ntBASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Gm44364-201ENSMUST00000198368 141 ntBASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms