Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Gm36957-201ENSMUST00000192982 2824 ntBASIC13.82□□□□□ -0.2
Ddx41Q91VN6 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Gm23119-201ENSMUST00000158610 140 ntBASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Gm29615-201ENSMUST00000185371 697 ntBASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Gm28224-201ENSMUST00000186078 697 ntBASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Gm29001-201ENSMUST00000186177 697 ntBASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Gm28292-201ENSMUST00000186593 697 ntBASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Gm28101-201ENSMUST00000187608 697 ntBASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Gm29076-201ENSMUST00000187689 697 ntBASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Gm28302-201ENSMUST00000187931 697 ntBASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Gm28646-201ENSMUST00000188220 697 ntBASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Gm28205-201ENSMUST00000189177 697 ntBASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Gm29032-201ENSMUST00000189797 697 ntBASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Gm28695-201ENSMUST00000190300 697 ntBASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Gm37448-201ENSMUST00000192795 697 ntBASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx41Q91VN6 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx41Q91VN6 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx41Q91VN6 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx41Q91VN6 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx41Q91VN6 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Ddx41Q91VN6 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx41Q91VN6 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx41Q91VN6 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx41Q91VN6 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.8□□□□□ -0.2
Ddx41Q91VN6 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx41Q91VN6 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx41Q91VN6 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx41Q91VN6 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx41Q91VN6 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx41Q91VN6 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx41Q91VN6 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.8□□□□□ -0.2
Ddx41Q91VN6 Gm12266-201ENSMUST00000120311 962 ntBASIC13.8□□□□□ -0.2
Ddx41Q91VN6 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.8□□□□□ -0.2
Ddx41Q91VN6 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.8□□□□□ -0.2
Ddx41Q91VN6 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.8□□□□□ -0.2
Ddx41Q91VN6 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.8□□□□□ -0.2
Ddx41Q91VN6 Gm37986-201ENSMUST00000193285 383 ntBASIC13.8□□□□□ -0.2
Ddx41Q91VN6 Gm44958-201ENSMUST00000203734 736 ntBASIC13.8□□□□□ -0.2
Ddx41Q91VN6 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx41Q91VN6 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.8□□□□□ -0.2
Ddx41Q91VN6 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx41Q91VN6 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ddx41Q91VN6 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx41Q91VN6 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx41Q91VN6 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx41Q91VN6 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ddx41Q91VN6 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.8□□□□□ -0.2
Ddx41Q91VN6 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx41Q91VN6 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx41Q91VN6 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx41Q91VN6 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx41Q91VN6 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx41Q91VN6 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx41Q91VN6 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx41Q91VN6 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx41Q91VN6 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.79□□□□□ -0.2
Ddx41Q91VN6 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx41Q91VN6 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx41Q91VN6 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx41Q91VN6 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx41Q91VN6 Gm12380-201ENSMUST00000119012 544 ntBASIC13.79□□□□□ -0.2
Ddx41Q91VN6 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.79□□□□□ -0.2
Ddx41Q91VN6 Gm14760-201ENSMUST00000121831 999 ntBASIC13.79□□□□□ -0.2
Ddx41Q91VN6 Gm5616-201ENSMUST00000165252 384 ntBASIC13.79□□□□□ -0.2
Ddx41Q91VN6 Gm8741-201ENSMUST00000174736 384 ntBASIC13.79□□□□□ -0.2
Ddx41Q91VN6 AY036118-201ENSMUST00000200021 923 ntBASIC13.79□□□□□ -0.2
Ddx41Q91VN6 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.79□□□□□ -0.2
Ddx41Q91VN6 Gm18730-201ENSMUST00000218038 343 ntBASIC13.79□□□□□ -0.2
Ddx41Q91VN6 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx41Q91VN6 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx41Q91VN6 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms