Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb17Q91VD8 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdhb17Q91VD8 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdhb17Q91VD8 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.31
Pcdhb17Q91VD8 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdhb17Q91VD8 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Tmod2-203ENSMUST00000164100 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Gm6023-201ENSMUST00000118217 606 ntBASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Gm31243-201ENSMUST00000197498 632 ntTSL 2 BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Gm43805-201ENSMUST00000198488 824 ntBASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Gm42897-201ENSMUST00000201486 2112 ntBASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Gm18160-201ENSMUST00000214279 827 ntBASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 AC157017.2-201ENSMUST00000218354 777 ntBASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Gm45930-201ENSMUST00000221330 292 ntBASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Gm31463-201ENSMUST00000208799 1479 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb17Q91VD8 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Serpini2-201ENSMUST00000039047 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Gm15568-201ENSMUST00000118589 1213 ntBASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Gm14465-201ENSMUST00000120603 567 ntBASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Gm15379-201ENSMUST00000121224 648 ntBASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Gm13786-201ENSMUST00000122371 333 ntBASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Gm25179-201ENSMUST00000122632 128 ntBASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Gm13316-201ENSMUST00000140537 691 ntBASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Gm8018-201ENSMUST00000173536 789 ntBASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Gm37614-201ENSMUST00000195645 210 ntBASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Gm44688-201ENSMUST00000209083 537 ntBASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 AC154528.3-201ENSMUST00000228011 679 ntBASIC13.13□□□□□ -0.31
Pcdhb17Q91VD8 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms