Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Gm14028-201ENSMUST00000117434 479 ntBASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Gm12164-201ENSMUST00000121695 551 ntBASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Gm5616-201ENSMUST00000165252 384 ntBASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Gm8741-201ENSMUST00000174736 384 ntBASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Gm37666-201ENSMUST00000194110 866 ntBASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rprd1aQ8VDS4 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Gm7003-201ENSMUST00000195089 312 ntBASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rprd1aQ8VDS4 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Gm28071-201ENSMUST00000190355 478 ntBASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Gm4607-201ENSMUST00000206649 577 ntBASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Gm17827-201ENSMUST00000211825 742 ntBASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Gm18730-201ENSMUST00000218038 343 ntBASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms