Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.01□□□□□ -0.49
Vps39Q8R5L3 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Gm25857-201ENSMUST00000082788 129 ntBASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Vps39Q8R5L3 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps39Q8R5L3 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vps39Q8R5L3 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps39Q8R5L3 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps39Q8R5L3 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Vps39Q8R5L3 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vps39Q8R5L3 Gm42913-201ENSMUST00000197936 1853 ntBASIC12□□□□□ -0.49
Vps39Q8R5L3 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps39Q8R5L3 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12□□□□□ -0.49
Vps39Q8R5L3 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps39Q8R5L3 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vps39Q8R5L3 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vps39Q8R5L3 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Vps39Q8R5L3 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Vps39Q8R5L3 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps39Q8R5L3 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Vps39Q8R5L3 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps39Q8R5L3 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12□□□□□ -0.49
Vps39Q8R5L3 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vps39Q8R5L3 Gm13297-201ENSMUST00000120205 934 ntBASIC12□□□□□ -0.49
Vps39Q8R5L3 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12□□□□□ -0.49
Vps39Q8R5L3 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps39Q8R5L3 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12□□□□□ -0.49
Vps39Q8R5L3 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vps39Q8R5L3 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12□□□□□ -0.49
Vps39Q8R5L3 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Vps39Q8R5L3 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vps39Q8R5L3 AY702102-202ENSMUST00000194651 1173 ntBASIC12□□□□□ -0.49
Vps39Q8R5L3 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vps39Q8R5L3 Gm6013-201ENSMUST00000212264 699 ntBASIC12□□□□□ -0.49
Vps39Q8R5L3 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12□□□□□ -0.49
Vps39Q8R5L3 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12□□□□□ -0.49
Vps39Q8R5L3 AC154252.2-201ENSMUST00000223593 767 ntBASIC12□□□□□ -0.49
Vps39Q8R5L3 AC163667.3-201ENSMUST00000225774 222 ntBASIC12□□□□□ -0.49
Vps39Q8R5L3 AC113031.8-201ENSMUST00000227856 631 ntBASIC12□□□□□ -0.49
Vps39Q8R5L3 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps39Q8R5L3 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Vps39Q8R5L3 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps39Q8R5L3 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12□□□□□ -0.49
Vps39Q8R5L3 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12□□□□□ -0.49
Vps39Q8R5L3 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Vps39Q8R5L3 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vps39Q8R5L3 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Vps39Q8R5L3 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vps39Q8R5L3 Gm9200-201ENSMUST00000118513 1354 ntBASIC12□□□□□ -0.49
Vps39Q8R5L3 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12□□□□□ -0.49
Vps39Q8R5L3 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps39Q8R5L3 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12□□□□□ -0.49
Vps39Q8R5L3 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12□□□□□ -0.49
Vps39Q8R5L3 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps39Q8R5L3 Gm37131-201ENSMUST00000192502 1561 ntBASIC12□□□□□ -0.49
Vps39Q8R5L3 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12□□□□□ -0.49
Vps39Q8R5L3 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Vps39Q8R5L3 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms