Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Gm37131-201ENSMUST00000192502 1561 ntBASIC9.75□□□□□ -0.85
Nup35Q8R4R6 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Gm8155-201ENSMUST00000216363 1612 ntBASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Gm9796-201ENSMUST00000062249 2250 ntBASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Gm26684-202ENSMUST00000228229 8257 ntBASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Gm13142-201ENSMUST00000117213 1453 ntBASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Gm9431-201ENSMUST00000119765 1051 ntBASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Gm27892-201ENSMUST00000185017 106 ntBASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Gm42937-201ENSMUST00000197360 752 ntBASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Gm44711-201ENSMUST00000205414 1264 ntBASIC9.75□□□□□ -0.85
Nup35Q8R4R6 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Gm37969-201ENSMUST00000195777 3409 ntBASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup35Q8R4R6 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nup35Q8R4R6 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Nup35Q8R4R6 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nup35Q8R4R6 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
Nup35Q8R4R6 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nup35Q8R4R6 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Nup35Q8R4R6 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nup35Q8R4R6 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nup35Q8R4R6 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC9.74□□□□□ -0.85
Nup35Q8R4R6 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nup35Q8R4R6 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC9.74□□□□□ -0.85
Nup35Q8R4R6 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Nup35Q8R4R6 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Nup35Q8R4R6 AC211878.3-201ENSMUST00000222629 2018 ntBASIC9.74□□□□□ -0.85
Nup35Q8R4R6 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nup35Q8R4R6 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC9.74□□□□□ -0.85
Nup35Q8R4R6 Gm14247-201ENSMUST00000120950 237 ntBASIC9.74□□□□□ -0.85
Nup35Q8R4R6 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC9.74□□□□□ -0.85
Nup35Q8R4R6 Gm23984-201ENSMUST00000157139 203 ntBASIC9.74□□□□□ -0.85
Nup35Q8R4R6 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC9.74□□□□□ -0.85
Nup35Q8R4R6 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nup35Q8R4R6 Gm27486-201ENSMUST00000184923 80 ntBASIC9.74□□□□□ -0.85
Nup35Q8R4R6 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC9.74□□□□□ -0.85
Nup35Q8R4R6 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Nup35Q8R4R6 Gm7067-201ENSMUST00000207698 1249 ntBASIC9.74□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms