Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clrn1Q8K445 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.31□□□□□ -0.6
Clrn1Q8K445 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Gm13296-201ENSMUST00000117854 997 ntBASIC11.31□□□□□ -0.6
Clrn1Q8K445 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Clrn1Q8K445 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Gm25700-201ENSMUST00000177693 110 ntBASIC11.31□□□□□ -0.6
Clrn1Q8K445 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.31□□□□□ -0.6
Clrn1Q8K445 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Clrn1Q8K445 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.31□□□□□ -0.6
Clrn1Q8K445 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Clrn1Q8K445 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.31□□□□□ -0.6
Clrn1Q8K445 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.31□□□□□ -0.6
Clrn1Q8K445 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.31□□□□□ -0.6
Clrn1Q8K445 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Clrn1Q8K445 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Clrn1Q8K445 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Clrn1Q8K445 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Clrn1Q8K445 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Clrn1Q8K445 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Clrn1Q8K445 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Clrn1Q8K445 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Clrn1Q8K445 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Clrn1Q8K445 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Clrn1Q8K445 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Clrn1Q8K445 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Clrn1Q8K445 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.3□□□□□ -0.6
Clrn1Q8K445 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.3□□□□□ -0.6
Clrn1Q8K445 Gm13665-201ENSMUST00000120830 528 ntBASIC11.3□□□□□ -0.6
Clrn1Q8K445 Gm12164-201ENSMUST00000121695 551 ntBASIC11.3□□□□□ -0.6
Clrn1Q8K445 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.3□□□□□ -0.6
Clrn1Q8K445 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Clrn1Q8K445 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Clrn1Q8K445 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Clrn1Q8K445 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Clrn1Q8K445 Gm25890-201ENSMUST00000177643 165 ntBASIC11.3□□□□□ -0.6
Clrn1Q8K445 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.3□□□□□ -0.6
Clrn1Q8K445 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.3□□□□□ -0.6
Clrn1Q8K445 Gm22614-201ENSMUST00000178300 165 ntBASIC11.3□□□□□ -0.6
Clrn1Q8K445 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Clrn1Q8K445 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.3□□□□□ -0.6
Clrn1Q8K445 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Clrn1Q8K445 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Clrn1Q8K445 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Clrn1Q8K445 Gm45224-201ENSMUST00000208203 414 ntBASIC11.3□□□□□ -0.6
Clrn1Q8K445 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.3□□□□□ -0.6
Clrn1Q8K445 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.3□□□□□ -0.6
Clrn1Q8K445 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Clrn1Q8K445 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Clrn1Q8K445 Gm22042-201ENSMUST00000082989 165 ntBASIC11.3□□□□□ -0.6
Clrn1Q8K445 Gm26110-201ENSMUST00000083971 165 ntBASIC11.3□□□□□ -0.6
Clrn1Q8K445 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.3□□□□□ -0.6
Clrn1Q8K445 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms