Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Gm15610-201ENSMUST00000120584 195 ntBASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Gm38241-201ENSMUST00000192641 898 ntBASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Gm17931-201ENSMUST00000208132 634 ntBASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28aQ8CEI3 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Gm25261-201ENSMUST00000157416 134 ntBASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Gm28882-201ENSMUST00000185504 314 ntBASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Snora73a-201ENSMUST00000082453 205 ntBASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccdc28aQ8CEI3 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms