Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vcpip1Q8CDG3 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vcpip1Q8CDG3 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vcpip1Q8CDG3 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vcpip1Q8CDG3 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.9□□□□□ -0.34
Vcpip1Q8CDG3 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vcpip1Q8CDG3 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.9□□□□□ -0.34
Vcpip1Q8CDG3 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vcpip1Q8CDG3 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vcpip1Q8CDG3 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.9□□□□□ -0.34
Vcpip1Q8CDG3 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Vcpip1Q8CDG3 Gm18711-201ENSMUST00000199341 750 ntBASIC12.9□□□□□ -0.34
Vcpip1Q8CDG3 Gm5950-201ENSMUST00000213337 772 ntBASIC12.9□□□□□ -0.34
Vcpip1Q8CDG3 Gm10608-202ENSMUST00000213924 676 ntBASIC12.9□□□□□ -0.34
Vcpip1Q8CDG3 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vcpip1Q8CDG3 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vcpip1Q8CDG3 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vcpip1Q8CDG3 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vcpip1Q8CDG3 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Vcpip1Q8CDG3 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Vcpip1Q8CDG3 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vcpip1Q8CDG3 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vcpip1Q8CDG3 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vcpip1Q8CDG3 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vcpip1Q8CDG3 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vcpip1Q8CDG3 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.9□□□□□ -0.34
Vcpip1Q8CDG3 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.9□□□□□ -0.34
Vcpip1Q8CDG3 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vcpip1Q8CDG3 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Gm12036-201ENSMUST00000120008 530 ntBASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Gm14832-201ENSMUST00000121289 322 ntBASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Morn2-202ENSMUST00000227729 656 ntBASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Vcpip1Q8CDG3 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Gm24845-201ENSMUST00000158034 109 ntBASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Gm2991-201ENSMUST00000173338 480 ntBASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms