Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm12857-201ENSMUST00000117678 592 ntBASIC14□□□□□ -0.17
Usp44Q8C2S0 Gm11960-201ENSMUST00000122068 925 ntBASIC14□□□□□ -0.17
Usp44Q8C2S0 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14□□□□□ -0.17
Usp44Q8C2S0 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp44Q8C2S0 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC14□□□□□ -0.17
Usp44Q8C2S0 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp44Q8C2S0 Gm18056-201ENSMUST00000207670 568 ntBASIC14□□□□□ -0.17
Usp44Q8C2S0 Gm18061-201ENSMUST00000208350 562 ntBASIC14□□□□□ -0.17
Usp44Q8C2S0 Gm18063-201ENSMUST00000208529 568 ntBASIC14□□□□□ -0.17
Usp44Q8C2S0 Gm18052-201ENSMUST00000208750 559 ntBASIC14□□□□□ -0.17
Usp44Q8C2S0 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC14□□□□□ -0.17
Usp44Q8C2S0 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Usp44Q8C2S0 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp44Q8C2S0 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp44Q8C2S0 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp44Q8C2S0 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp44Q8C2S0 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Usp44Q8C2S0 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp44Q8C2S0 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Usp44Q8C2S0 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Usp44Q8C2S0 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC14□□□□□ -0.17
Usp44Q8C2S0 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp44Q8C2S0 Gm3836-201ENSMUST00000211377 1613 ntBASIC14□□□□□ -0.17
Usp44Q8C2S0 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp44Q8C2S0 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp44Q8C2S0 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Usp44Q8C2S0 Gm18986-201ENSMUST00000216029 1986 ntBASIC14□□□□□ -0.17
Usp44Q8C2S0 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Usp44Q8C2S0 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp44Q8C2S0 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp44Q8C2S0 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Gm11439-201ENSMUST00000118598 409 ntBASIC13.99□□□□□ -0.17
Usp44Q8C2S0 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Gm6450-201ENSMUST00000200896 574 ntBASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 AC113082.1-201ENSMUST00000217324 327 ntBASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.99□□□□□ -0.17
Usp44Q8C2S0 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp44Q8C2S0 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Usp44Q8C2S0 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Usp44Q8C2S0 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp44Q8C2S0 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Usp44Q8C2S0 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp44Q8C2S0 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp44Q8C2S0 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp44Q8C2S0 Gm13347-201ENSMUST00000120298 1353 ntBASIC13.98□□□□□ -0.17
Usp44Q8C2S0 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp44Q8C2S0 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Usp44Q8C2S0 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp44Q8C2S0 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
Usp44Q8C2S0 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp44Q8C2S0 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
Usp44Q8C2S0 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.98□□□□□ -0.17
Usp44Q8C2S0 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Usp44Q8C2S0 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Usp44Q8C2S0 Gm16505-201ENSMUST00000179981 232 ntBASIC13.98□□□□□ -0.17
Usp44Q8C2S0 Gm27552-201ENSMUST00000183351 62 ntBASIC13.98□□□□□ -0.17
Usp44Q8C2S0 Gm27844-201ENSMUST00000183613 62 ntBASIC13.98□□□□□ -0.17
Usp44Q8C2S0 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC13.98□□□□□ -0.17
Usp44Q8C2S0 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.98□□□□□ -0.17
Usp44Q8C2S0 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.98□□□□□ -0.17
Usp44Q8C2S0 Gm38117-201ENSMUST00000194653 939 ntBASIC13.98□□□□□ -0.17
Usp44Q8C2S0 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms