Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trerf1Q8BXJ2 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trerf1Q8BXJ2 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trerf1Q8BXJ2 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trerf1Q8BXJ2 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trerf1Q8BXJ2 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trerf1Q8BXJ2 Gm11222-201ENSMUST00000119005 738 ntBASIC12.75□□□□□ -0.37
Trerf1Q8BXJ2 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.75□□□□□ -0.37
Trerf1Q8BXJ2 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trerf1Q8BXJ2 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trerf1Q8BXJ2 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trerf1Q8BXJ2 Gm9022-201ENSMUST00000182482 992 ntBASIC12.75□□□□□ -0.37
Trerf1Q8BXJ2 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.75□□□□□ -0.37
Trerf1Q8BXJ2 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.75□□□□□ -0.37
Trerf1Q8BXJ2 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trerf1Q8BXJ2 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.75□□□□□ -0.37
Trerf1Q8BXJ2 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.75□□□□□ -0.37
Trerf1Q8BXJ2 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.75□□□□□ -0.37
Trerf1Q8BXJ2 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trerf1Q8BXJ2 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trerf1Q8BXJ2 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trerf1Q8BXJ2 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trerf1Q8BXJ2 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Trerf1Q8BXJ2 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trerf1Q8BXJ2 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trerf1Q8BXJ2 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
Trerf1Q8BXJ2 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trerf1Q8BXJ2 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trerf1Q8BXJ2 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.75□□□□□ -0.37
Trerf1Q8BXJ2 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Gm12058-201ENSMUST00000118614 437 ntBASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Gm14760-201ENSMUST00000121831 999 ntBASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Gm9257-201ENSMUST00000221254 232 ntBASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trerf1Q8BXJ2 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms