Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.58□□□□□ -0.72
SprnQ8BWU1 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Gm13342-201ENSMUST00000121055 207 ntBASIC10.58□□□□□ -0.72
SprnQ8BWU1 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
SprnQ8BWU1 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Mir8109-201ENSMUST00000184375 117 ntBASIC10.58□□□□□ -0.72
SprnQ8BWU1 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.58□□□□□ -0.72
SprnQ8BWU1 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SprnQ8BWU1 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.58□□□□□ -0.72
SprnQ8BWU1 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.58□□□□□ -0.72
SprnQ8BWU1 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.58□□□□□ -0.72
SprnQ8BWU1 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.58□□□□□ -0.72
SprnQ8BWU1 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
SprnQ8BWU1 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.58□□□□□ -0.72
SprnQ8BWU1 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Gm5620-201ENSMUST00000077991 1348 ntBASIC10.58□□□□□ -0.72
SprnQ8BWU1 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SprnQ8BWU1 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SprnQ8BWU1 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SprnQ8BWU1 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SprnQ8BWU1 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SprnQ8BWU1 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SprnQ8BWU1 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SprnQ8BWU1 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SprnQ8BWU1 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
SprnQ8BWU1 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SprnQ8BWU1 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SprnQ8BWU1 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.57□□□□□ -0.72
SprnQ8BWU1 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.57□□□□□ -0.72
SprnQ8BWU1 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.57□□□□□ -0.72
SprnQ8BWU1 Gm25261-201ENSMUST00000157416 134 ntBASIC10.57□□□□□ -0.72
SprnQ8BWU1 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SprnQ8BWU1 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.57□□□□□ -0.72
SprnQ8BWU1 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.57□□□□□ -0.72
SprnQ8BWU1 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SprnQ8BWU1 Gm17931-201ENSMUST00000208132 634 ntBASIC10.57□□□□□ -0.72
SprnQ8BWU1 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SprnQ8BWU1 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.57□□□□□ -0.72
SprnQ8BWU1 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.57□□□□□ -0.72
SprnQ8BWU1 Lect2-202ENSMUST00000225183 823 ntBASIC10.57□□□□□ -0.72
SprnQ8BWU1 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SprnQ8BWU1 Gm10076-201ENSMUST00000073238 384 ntBASIC10.57□□□□□ -0.72
SprnQ8BWU1 Snora73a-201ENSMUST00000082453 205 ntBASIC10.57□□□□□ -0.72
SprnQ8BWU1 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
SprnQ8BWU1 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SprnQ8BWU1 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SprnQ8BWU1 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SprnQ8BWU1 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.57□□□□□ -0.72
SprnQ8BWU1 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.57□□□□□ -0.72
SprnQ8BWU1 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.57□□□□□ -0.72
SprnQ8BWU1 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
SprnQ8BWU1 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
SprnQ8BWU1 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SprnQ8BWU1 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
SprnQ8BWU1 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.56□□□□□ -0.72
SprnQ8BWU1 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SprnQ8BWU1 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SprnQ8BWU1 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
SprnQ8BWU1 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SprnQ8BWU1 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SprnQ8BWU1 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
SprnQ8BWU1 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SprnQ8BWU1 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SprnQ8BWU1 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SprnQ8BWU1 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SprnQ8BWU1 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
SprnQ8BWU1 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SprnQ8BWU1 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
SprnQ8BWU1 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.56□□□□□ -0.72
SprnQ8BWU1 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.56□□□□□ -0.72
SprnQ8BWU1 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SprnQ8BWU1 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SprnQ8BWU1 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.56□□□□□ -0.72
SprnQ8BWU1 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.56□□□□□ -0.72
SprnQ8BWU1 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.56□□□□□ -0.72
SprnQ8BWU1 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SprnQ8BWU1 Gm27501-201ENSMUST00000183599 107 ntBASIC10.56□□□□□ -0.72
SprnQ8BWU1 Gm38314-201ENSMUST00000195709 625 ntBASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms