Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gm16030-201ENSMUST00000159098 603 ntBASIC16.74■□□□□ 0.27
Usp54Q8BL06 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Usp54Q8BL06 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC16.74■□□□□ 0.27
Usp54Q8BL06 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Usp54Q8BL06 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp54Q8BL06 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Usp54Q8BL06 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp54Q8BL06 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp54Q8BL06 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp54Q8BL06 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Usp54Q8BL06 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp54Q8BL06 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp54Q8BL06 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC16.74■□□□□ 0.27
Usp54Q8BL06 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Usp54Q8BL06 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp54Q8BL06 Gm17435-202ENSMUST00000212699 1998 ntBASIC16.73■□□□□ 0.27
Usp54Q8BL06 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp54Q8BL06 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp54Q8BL06 Gm12389-201ENSMUST00000117696 418 ntBASIC16.73■□□□□ 0.27
Usp54Q8BL06 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Usp54Q8BL06 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC16.73■□□□□ 0.27
Usp54Q8BL06 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Usp54Q8BL06 Gm5870-201ENSMUST00000196461 282 ntBASIC16.73■□□□□ 0.27
Usp54Q8BL06 Gm43778-201ENSMUST00000199438 199 ntBASIC16.73■□□□□ 0.27
Usp54Q8BL06 Gm6855-201ENSMUST00000206307 790 ntBASIC16.73■□□□□ 0.27
Usp54Q8BL06 Gm18499-201ENSMUST00000220808 1021 ntBASIC16.73■□□□□ 0.27
Usp54Q8BL06 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Usp54Q8BL06 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp54Q8BL06 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Usp54Q8BL06 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Usp54Q8BL06 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp54Q8BL06 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Usp54Q8BL06 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Usp54Q8BL06 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Usp54Q8BL06 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Usp54Q8BL06 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp54Q8BL06 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp54Q8BL06 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Usp54Q8BL06 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Usp54Q8BL06 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp54Q8BL06 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp54Q8BL06 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp54Q8BL06 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp54Q8BL06 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp54Q8BL06 Gm25562-201ENSMUST00000104608 133 ntBASIC16.72■□□□□ 0.27
Usp54Q8BL06 Gm16219-201ENSMUST00000120096 274 ntBASIC16.72■□□□□ 0.27
Usp54Q8BL06 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp54Q8BL06 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Usp54Q8BL06 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Usp54Q8BL06 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Usp54Q8BL06 Gm27390-201ENSMUST00000184516 176 ntBASIC16.72■□□□□ 0.27
Usp54Q8BL06 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC16.72■□□□□ 0.27
Usp54Q8BL06 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC16.72■□□□□ 0.27
Usp54Q8BL06 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC16.72■□□□□ 0.27
Usp54Q8BL06 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC16.72■□□□□ 0.27
Usp54Q8BL06 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Usp54Q8BL06 Gm30946-201ENSMUST00000198288 724 ntBASIC16.72■□□□□ 0.27
Usp54Q8BL06 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC16.72■□□□□ 0.27
Usp54Q8BL06 Gm18065-201ENSMUST00000221395 526 ntBASIC16.72■□□□□ 0.27
Usp54Q8BL06 Lect2-202ENSMUST00000225183 823 ntBASIC16.72■□□□□ 0.27
Usp54Q8BL06 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp54Q8BL06 Smok4a-201ENSMUST00000074512 1455 ntBASIC16.72■□□□□ 0.27
Usp54Q8BL06 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp54Q8BL06 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp54Q8BL06 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Usp54Q8BL06 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp54Q8BL06 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Usp54Q8BL06 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp54Q8BL06 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp54Q8BL06 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp54Q8BL06 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Usp54Q8BL06 Ntrk2-209ENSMUST00000225950 2640 ntBASIC16.72■□□□□ 0.27
Usp54Q8BL06 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC16.72■□□□□ 0.27
Usp54Q8BL06 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp54Q8BL06 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Usp54Q8BL06 Gm18986-201ENSMUST00000216029 1986 ntBASIC16.72■□□□□ 0.27
Usp54Q8BL06 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Usp54Q8BL06 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp54Q8BL06 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp54Q8BL06 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp54Q8BL06 Mir1905-201ENSMUST00000122779 82 ntBASIC16.72■□□□□ 0.27
Usp54Q8BL06 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Usp54Q8BL06 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC16.72■□□□□ 0.27
Usp54Q8BL06 Gm44216-201ENSMUST00000203942 157 ntBASIC16.72■□□□□ 0.27
Usp54Q8BL06 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC16.72■□□□□ 0.27
Usp54Q8BL06 CT030170.2-201ENSMUST00000223267 126 ntBASIC16.72■□□□□ 0.27
Usp54Q8BL06 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp54Q8BL06 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp54Q8BL06 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp54Q8BL06 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp54Q8BL06 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp54Q8BL06 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp54Q8BL06 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp54Q8BL06 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp54Q8BL06 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp54Q8BL06 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp54Q8BL06 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp54Q8BL06 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp54Q8BL06 Gm43242-201ENSMUST00000199507 1776 ntBASIC16.71■□□□□ 0.27
Usp54Q8BL06 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms