Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Ighv2-1-201ENSMUST00000170946 353 ntBASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Gm9135-201ENSMUST00000182963 990 ntBASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Gm3726-201ENSMUST00000203110 785 ntBASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 CT009546.1-201ENSMUST00000222573 1120 ntBASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 AC129308.3-201ENSMUST00000225652 524 ntBASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Gm13117-201ENSMUST00000120894 691 ntBASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Gm45758-201ENSMUST00000212448 1006 ntBASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 AC114645.1-201ENSMUST00000215831 187 ntBASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Gm7959-201ENSMUST00000221823 1078 ntBASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx55Q6ZPL9 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Gm45199-201ENSMUST00000207640 1507 ntBASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Gm5621-201ENSMUST00000187303 640 ntBASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 AC168279.1-201ENSMUST00000214611 382 ntBASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 AC122346.3-201ENSMUST00000223983 306 ntBASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Lgi3-203ENSMUST00000226548 1001 ntBASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx55Q6ZPL9 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms