Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Nudcd1Q6PIP5 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.12□□□□□ -0.47
Nudcd1Q6PIP5 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd1Q6PIP5 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd1Q6PIP5 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd1Q6PIP5 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd1Q6PIP5 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Nudcd1Q6PIP5 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd1Q6PIP5 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd1Q6PIP5 Gm14058-201ENSMUST00000116082 735 ntBASIC12.12□□□□□ -0.47
Nudcd1Q6PIP5 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd1Q6PIP5 Gm25881-201ENSMUST00000157783 103 ntBASIC12.12□□□□□ -0.47
Nudcd1Q6PIP5 Mir3547-201ENSMUST00000175461 88 ntBASIC12.12□□□□□ -0.47
Nudcd1Q6PIP5 Gm3332-201ENSMUST00000189337 928 ntBASIC12.12□□□□□ -0.47
Nudcd1Q6PIP5 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.12□□□□□ -0.47
Nudcd1Q6PIP5 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd1Q6PIP5 Gm8956-201ENSMUST00000203939 825 ntBASIC12.12□□□□□ -0.47
Nudcd1Q6PIP5 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nudcd1Q6PIP5 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd1Q6PIP5 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Nudcd1Q6PIP5 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.12□□□□□ -0.47
Nudcd1Q6PIP5 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nudcd1Q6PIP5 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nudcd1Q6PIP5 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd1Q6PIP5 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd1Q6PIP5 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nudcd1Q6PIP5 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Nudcd1Q6PIP5 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Gm12164-201ENSMUST00000121695 551 ntBASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Gm20426-201ENSMUST00000173657 440 ntBASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nudcd1Q6PIP5 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Gm7851-201ENSMUST00000117574 323 ntBASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Gm8566-201ENSMUST00000120174 465 ntBASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Gm2965-201ENSMUST00000198365 343 ntBASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms