Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Gm8111-201ENSMUST00000117659 987 ntBASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Gm6653-201ENSMUST00000218063 1288 ntBASIC13.9□□□□□ -0.18
Nup98Q6PFD9 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 CT009527.1-201ENSMUST00000224205 339 ntBASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Gm21759-201ENSMUST00000178345 1828 ntBASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Mir6407-201ENSMUST00000184510 101 ntBASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 AC122346.3-201ENSMUST00000223983 306 ntBASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nup98Q6PFD9 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Nup98Q6PFD9 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup98Q6PFD9 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup98Q6PFD9 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup98Q6PFD9 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Nup98Q6PFD9 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nup98Q6PFD9 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nup98Q6PFD9 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nup98Q6PFD9 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Nup98Q6PFD9 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup98Q6PFD9 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nup98Q6PFD9 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nup98Q6PFD9 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup98Q6PFD9 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Nup98Q6PFD9 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.89□□□□□ -0.19
Nup98Q6PFD9 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nup98Q6PFD9 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC13.89□□□□□ -0.19
Nup98Q6PFD9 AC238811.4-201ENSMUST00000178019 1246 ntBASIC13.89□□□□□ -0.19
Nup98Q6PFD9 AC238940.3-201ENSMUST00000178830 1246 ntBASIC13.89□□□□□ -0.19
Nup98Q6PFD9 Gm3726-201ENSMUST00000203110 785 ntBASIC13.89□□□□□ -0.19
Nup98Q6PFD9 Gm45410-201ENSMUST00000211331 1093 ntBASIC13.89□□□□□ -0.19
Nup98Q6PFD9 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC13.89□□□□□ -0.19
Nup98Q6PFD9 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup98Q6PFD9 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.89□□□□□ -0.19
Nup98Q6PFD9 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup98Q6PFD9 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup98Q6PFD9 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup98Q6PFD9 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup98Q6PFD9 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Nup98Q6PFD9 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup98Q6PFD9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup98Q6PFD9 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Nup98Q6PFD9 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup98Q6PFD9 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Gm12247-201ENSMUST00000117585 670 ntBASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup98Q6PFD9 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms