Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Krt39Q6IFX4 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.24□□□□□ -0.29
Krt39Q6IFX4 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Gm2546-201ENSMUST00000182630 991 ntBASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Gm3836-201ENSMUST00000211377 1613 ntBASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Krt39Q6IFX4 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Gm14832-201ENSMUST00000121289 322 ntBASIC13.23□□□□□ -0.29
Krt39Q6IFX4 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Gm43133-201ENSMUST00000197472 463 ntBASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Gm18054-201ENSMUST00000207539 555 ntBASIC13.23□□□□□ -0.29
Krt39Q6IFX4 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Gm9823-201ENSMUST00000051212 327 ntBASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt39Q6IFX4 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Krt39Q6IFX4 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt39Q6IFX4 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt39Q6IFX4 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt39Q6IFX4 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms