Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gli3Q61602 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gli3Q61602 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gli3Q61602 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Gli3Q61602 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gli3Q61602 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gli3Q61602 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gli3Q61602 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gli3Q61602 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC15.74■□□□□ 0.11
Gli3Q61602 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Gli3Q61602 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Gli3Q61602 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gli3Q61602 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Gli3Q61602 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Gli3Q61602 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Gli3Q61602 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gli3Q61602 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gli3Q61602 AC098716.1-201ENSMUST00000213527 703 ntBASIC15.74■□□□□ 0.11
Gli3Q61602 AC163638.2-201ENSMUST00000224920 827 ntBASIC15.74■□□□□ 0.11
Gli3Q61602 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gli3Q61602 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gli3Q61602 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gli3Q61602 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gli3Q61602 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gli3Q61602 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gli3Q61602 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Gli3Q61602 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gli3Q61602 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Gli3Q61602 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gli3Q61602 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gli3Q61602 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gli3Q61602 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Gli3Q61602 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Gli3Q61602 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Gli3Q61602 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gli3Q61602 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gli3Q61602 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Gli3Q61602 Gm22661-201ENSMUST00000104192 132 ntBASIC15.73■□□□□ 0.11
Gli3Q61602 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC15.73■□□□□ 0.11
Gli3Q61602 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC15.73■□□□□ 0.11
Gli3Q61602 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC15.73■□□□□ 0.11
Gli3Q61602 Ighv5-1-201ENSMUST00000193324 353 ntBASIC15.73■□□□□ 0.11
Gli3Q61602 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC15.73■□□□□ 0.11
Gli3Q61602 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gli3Q61602 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gli3Q61602 AC129217.1-201ENSMUST00000225181 642 ntBASIC15.73■□□□□ 0.11
Gli3Q61602 AC118639.1-202ENSMUST00000226957 653 ntBASIC15.73■□□□□ 0.11
Gli3Q61602 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gli3Q61602 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gli3Q61602 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Gli3Q61602 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Gli3Q61602 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gli3Q61602 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gli3Q61602 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC15.73■□□□□ 0.11
Gli3Q61602 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Gli3Q61602 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Gli3Q61602 Gm13456-201ENSMUST00000118928 1365 ntBASIC15.73■□□□□ 0.11
Gli3Q61602 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gli3Q61602 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC15.72■□□□□ 0.11
Gli3Q61602 Gm8873-201ENSMUST00000217847 1439 ntBASIC15.72■□□□□ 0.11
Gli3Q61602 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC15.72■□□□□ 0.11
Gli3Q61602 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Gli3Q61602 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gli3Q61602 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gli3Q61602 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gli3Q61602 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gli3Q61602 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gli3Q61602 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gli3Q61602 Gm14740-201ENSMUST00000118538 1150 ntBASIC15.72■□□□□ 0.11
Gli3Q61602 Gm11544-201ENSMUST00000120215 382 ntBASIC15.72■□□□□ 0.11
Gli3Q61602 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gli3Q61602 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gli3Q61602 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC15.72■□□□□ 0.11
Gli3Q61602 Gm38145-201ENSMUST00000192319 693 ntBASIC15.72■□□□□ 0.11
Gli3Q61602 Gm44605-201ENSMUST00000206892 949 ntBASIC15.72■□□□□ 0.11
Gli3Q61602 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gli3Q61602 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC15.72■□□□□ 0.11
Gli3Q61602 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gli3Q61602 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gli3Q61602 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gli3Q61602 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gli3Q61602 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gli3Q61602 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gli3Q61602 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gli3Q61602 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gli3Q61602 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gli3Q61602 Gm5053-201ENSMUST00000208361 1678 ntBASIC15.72■□□□□ 0.11
Gli3Q61602 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gli3Q61602 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gli3Q61602 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gli3Q61602 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC15.72■□□□□ 0.11
Gli3Q61602 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Gli3Q61602 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gli3Q61602 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gli3Q61602 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gli3Q61602 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gli3Q61602 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC15.71■□□□□ 0.11
Gli3Q61602 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Gli3Q61602 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gli3Q61602 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms