Protein–RNA interactions for Protein: Q60803

Traf3, TNF receptor-associated factor 3, mousemouse

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3Q60803 Gm14277-201ENSMUST00000121195 360 ntBASIC12.54□□□□□ -0.4
Traf3Q60803 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf3Q60803 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.54□□□□□ -0.4
Traf3Q60803 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.54□□□□□ -0.4
Traf3Q60803 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Traf3Q60803 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Traf3Q60803 Gm8343-201ENSMUST00000182705 994 ntBASIC12.54□□□□□ -0.4
Traf3Q60803 Gm43184-201ENSMUST00000197247 542 ntBASIC12.54□□□□□ -0.4
Traf3Q60803 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf3Q60803 Gm4157-201ENSMUST00000211647 679 ntBASIC12.54□□□□□ -0.4
Traf3Q60803 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.54□□□□□ -0.4
Traf3Q60803 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.54□□□□□ -0.4
Traf3Q60803 Gm270-201ENSMUST00000223010 976 ntBASIC12.54□□□□□ -0.4
Traf3Q60803 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf3Q60803 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf3Q60803 Gm5705-201ENSMUST00000066241 711 ntBASIC12.54□□□□□ -0.4
Traf3Q60803 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf3Q60803 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Traf3Q60803 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.54□□□□□ -0.4
Traf3Q60803 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf3Q60803 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf3Q60803 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf3Q60803 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Traf3Q60803 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf3Q60803 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf3Q60803 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf3Q60803 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf3Q60803 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Traf3Q60803 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf3Q60803 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Traf3Q60803 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf3Q60803 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf3Q60803 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.53□□□□□ -0.4
Traf3Q60803 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.53□□□□□ -0.4
Traf3Q60803 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.53□□□□□ -0.4
Traf3Q60803 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.53□□□□□ -0.4
Traf3Q60803 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.53□□□□□ -0.4
Traf3Q60803 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Traf3Q60803 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.53□□□□□ -0.4
Traf3Q60803 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
Traf3Q60803 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 Gm27530-201ENSMUST00000184096 98 ntBASIC12.53□□□□□ -0.4
Traf3Q60803 Gm18038-201ENSMUST00000197900 485 ntBASIC12.53□□□□□ -0.4
Traf3Q60803 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.53□□□□□ -0.4
Traf3Q60803 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 Gm35960-201ENSMUST00000202712 767 ntBASIC12.53□□□□□ -0.4
Traf3Q60803 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Traf3Q60803 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Traf3Q60803 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.53□□□□□ -0.4
Traf3Q60803 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.53□□□□□ -0.4
Traf3Q60803 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Traf3Q60803 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.52□□□□□ -0.4
Traf3Q60803 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.52□□□□□ -0.4
Traf3Q60803 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Traf3Q60803 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Traf3Q60803 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Traf3Q60803 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Traf3Q60803 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.52□□□□□ -0.4
Traf3Q60803 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Traf3Q60803 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Traf3Q60803 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Traf3Q60803 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.52□□□□□ -0.4
Traf3Q60803 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.52□□□□□ -0.41
Traf3Q60803 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Traf3Q60803 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Traf3Q60803 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Traf3Q60803 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.52□□□□□ -0.41
Traf3Q60803 Gm14441-201ENSMUST00000121960 540 ntBASIC12.52□□□□□ -0.41
Traf3Q60803 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms