Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chrna5Q2MKA5 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Chrna5Q2MKA5 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chrna5Q2MKA5 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC14.2□□□□□ -0.14
Chrna5Q2MKA5 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Gm14807-201ENSMUST00000116640 983 ntBASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Gm15615-201ENSMUST00000118876 198 ntBASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Gm11244-201ENSMUST00000121243 237 ntBASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Gm4862-201ENSMUST00000170405 438 ntBASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Gm7902-201ENSMUST00000198842 947 ntBASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Gm18460-201ENSMUST00000208088 464 ntBASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Gm18204-201ENSMUST00000209835 793 ntBASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Gm44152-201ENSMUST00000205007 1691 ntBASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna5Q2MKA5 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Gm12948-201ENSMUST00000119406 682 ntBASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Gm10169-201ENSMUST00000121822 348 ntBASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Gm18201-201ENSMUST00000174735 875 ntBASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Gm5700-201ENSMUST00000191483 989 ntBASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Gm30671-201ENSMUST00000214898 318 ntBASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 CT009546.1-201ENSMUST00000222573 1120 ntBASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna5Q2MKA5 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna5Q2MKA5 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna5Q2MKA5 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Chrna5Q2MKA5 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna5Q2MKA5 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna5Q2MKA5 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna5Q2MKA5 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna5Q2MKA5 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna5Q2MKA5 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Chrna5Q2MKA5 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna5Q2MKA5 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna5Q2MKA5 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Chrna5Q2MKA5 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna5Q2MKA5 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Chrna5Q2MKA5 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna5Q2MKA5 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC14.17□□□□□ -0.14
Chrna5Q2MKA5 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms