Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Ntng1-201ENSMUST00000051253 327 ntBASIC13.17□□□□□ -0.3
Lig3P97386 Gm10312-201ENSMUST00000078515 489 ntBASIC13.17□□□□□ -0.3
Lig3P97386 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Lig3P97386 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lig3P97386 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lig3P97386 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lig3P97386 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lig3P97386 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lig3P97386 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Lig3P97386 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lig3P97386 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Lig3P97386 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lig3P97386 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lig3P97386 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lig3P97386 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lig3P97386 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Lig3P97386 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lig3P97386 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lig3P97386 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lig3P97386 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lig3P97386 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Lig3P97386 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lig3P97386 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lig3P97386 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lig3P97386 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Lig3P97386 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lig3P97386 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lig3P97386 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lig3P97386 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lig3P97386 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Lig3P97386 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lig3P97386 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lig3P97386 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.16□□□□□ -0.3
Lig3P97386 Gm6407-201ENSMUST00000176468 549 ntBASIC13.16□□□□□ -0.3
Lig3P97386 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.16□□□□□ -0.3
Lig3P97386 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lig3P97386 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lig3P97386 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.16□□□□□ -0.3
Lig3P97386 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.16□□□□□ -0.3
Lig3P97386 AC135469.1-201ENSMUST00000225984 772 ntBASIC13.16□□□□□ -0.3
Lig3P97386 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.16□□□□□ -0.3
Lig3P97386 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lig3P97386 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Lig3P97386 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.16□□□□□ -0.3
Lig3P97386 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lig3P97386 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lig3P97386 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lig3P97386 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lig3P97386 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lig3P97386 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lig3P97386 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lig3P97386 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lig3P97386 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lig3P97386 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Lig3P97386 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lig3P97386 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lig3P97386 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lig3P97386 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lig3P97386 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lig3P97386 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lig3P97386 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lig3P97386 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Lig3P97386 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Lig3P97386 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lig3P97386 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lig3P97386 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lig3P97386 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lig3P97386 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Lig3P97386 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.15□□□□□ -0.3
Lig3P97386 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Lig3P97386 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lig3P97386 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lig3P97386 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lig3P97386 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Lig3P97386 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Lig3P97386 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.15□□□□□ -0.3
Lig3P97386 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lig3P97386 Gm14704-201ENSMUST00000120300 874 ntBASIC13.15□□□□□ -0.3
Lig3P97386 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.15□□□□□ -0.3
Lig3P97386 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lig3P97386 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lig3P97386 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.15□□□□□ -0.3
Lig3P97386 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC13.15□□□□□ -0.3
Lig3P97386 Mir6958-201ENSMUST00000184207 73 ntBASIC13.15□□□□□ -0.3
Lig3P97386 Gm37201-201ENSMUST00000191845 523 ntBASIC13.15□□□□□ -0.3
Lig3P97386 Gm17812-201ENSMUST00000204935 318 ntBASIC13.15□□□□□ -0.3
Lig3P97386 Gm7600-201ENSMUST00000209657 785 ntBASIC13.15□□□□□ -0.3
Lig3P97386 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lig3P97386 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.15□□□□□ -0.3
Lig3P97386 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.15□□□□□ -0.3
Lig3P97386 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lig3P97386 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lig3P97386 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Lig3P97386 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Lig3P97386 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lig3P97386 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC13.15□□□□□ -0.3
Lig3P97386 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.15□□□□□ -0.3
Lig3P97386 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lig3P97386 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lig3P97386 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms