Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.98□□□□□ -0.33
CiitaP79621 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CiitaP79621 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CiitaP79621 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CiitaP79621 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CiitaP79621 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CiitaP79621 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CiitaP79621 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CiitaP79621 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CiitaP79621 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CiitaP79621 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CiitaP79621 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
CiitaP79621 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.98□□□□□ -0.33
CiitaP79621 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CiitaP79621 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CiitaP79621 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CiitaP79621 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CiitaP79621 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CiitaP79621 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.97□□□□□ -0.33
CiitaP79621 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.97□□□□□ -0.33
CiitaP79621 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CiitaP79621 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CiitaP79621 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
CiitaP79621 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
CiitaP79621 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CiitaP79621 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CiitaP79621 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.97□□□□□ -0.33
CiitaP79621 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CiitaP79621 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CiitaP79621 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CiitaP79621 Gm15207-201ENSMUST00000119259 442 ntBASIC12.97□□□□□ -0.33
CiitaP79621 Gm14441-201ENSMUST00000121960 540 ntBASIC12.97□□□□□ -0.33
CiitaP79621 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CiitaP79621 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CiitaP79621 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CiitaP79621 Gm22902-201ENSMUST00000158488 302 ntBASIC12.97□□□□□ -0.33
CiitaP79621 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.97□□□□□ -0.33
CiitaP79621 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.97□□□□□ -0.33
CiitaP79621 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.97□□□□□ -0.33
CiitaP79621 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.97□□□□□ -0.33
CiitaP79621 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.97□□□□□ -0.33
CiitaP79621 Gm6905-201ENSMUST00000205729 511 ntBASIC12.97□□□□□ -0.33
CiitaP79621 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.97□□□□□ -0.33
CiitaP79621 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.97□□□□□ -0.33
CiitaP79621 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.97□□□□□ -0.33
CiitaP79621 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.97□□□□□ -0.33
CiitaP79621 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CiitaP79621 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CiitaP79621 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.97□□□□□ -0.33
CiitaP79621 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CiitaP79621 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CiitaP79621 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CiitaP79621 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CiitaP79621 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CiitaP79621 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CiitaP79621 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
CiitaP79621 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CiitaP79621 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.97□□□□□ -0.33
CiitaP79621 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.97□□□□□ -0.33
CiitaP79621 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CiitaP79621 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CiitaP79621 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CiitaP79621 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CiitaP79621 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CiitaP79621 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CiitaP79621 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CiitaP79621 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CiitaP79621 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
CiitaP79621 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CiitaP79621 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
CiitaP79621 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CiitaP79621 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.96□□□□□ -0.33
CiitaP79621 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CiitaP79621 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CiitaP79621 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CiitaP79621 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
CiitaP79621 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CiitaP79621 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CiitaP79621 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CiitaP79621 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CiitaP79621 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CiitaP79621 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CiitaP79621 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CiitaP79621 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CiitaP79621 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.96□□□□□ -0.33
CiitaP79621 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CiitaP79621 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CiitaP79621 Gm10774-201ENSMUST00000188689 204 ntBASIC12.96□□□□□ -0.33
CiitaP79621 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CiitaP79621 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CiitaP79621 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.96□□□□□ -0.33
CiitaP79621 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.96□□□□□ -0.33
CiitaP79621 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.96□□□□□ -0.33
CiitaP79621 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.96□□□□□ -0.33
CiitaP79621 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.96□□□□□ -0.33
CiitaP79621 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CiitaP79621 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CiitaP79621 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CiitaP79621 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
CiitaP79621 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms