Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.32□□□□□ -0.44
Msx3P70354 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.32□□□□□ -0.44
Msx3P70354 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Msx3P70354 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Msx3P70354 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Msx3P70354 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Msx3P70354 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Msx3P70354 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Msx3P70354 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Msx3P70354 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Msx3P70354 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.32□□□□□ -0.44
Msx3P70354 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Msx3P70354 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Msx3P70354 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Msx3P70354 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Msx3P70354 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Msx3P70354 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Msx3P70354 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Msx3P70354 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.32□□□□□ -0.44
Msx3P70354 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Msx3P70354 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Msx3P70354 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Msx3P70354 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.31□□□□□ -0.44
Msx3P70354 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.31□□□□□ -0.44
Msx3P70354 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Msx3P70354 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Msx3P70354 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Msx3P70354 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Msx3P70354 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Msx3P70354 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Msx3P70354 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Msx3P70354 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Msx3P70354 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Msx3P70354 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Msx3P70354 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.31□□□□□ -0.44
Msx3P70354 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Msx3P70354 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Msx3P70354 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Msx3P70354 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.31□□□□□ -0.44
Msx3P70354 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Msx3P70354 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Msx3P70354 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Msx3P70354 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Msx3P70354 Gm14441-201ENSMUST00000121960 540 ntBASIC12.31□□□□□ -0.44
Msx3P70354 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Msx3P70354 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Msx3P70354 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Msx3P70354 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.31□□□□□ -0.44
Msx3P70354 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Msx3P70354 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Msx3P70354 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.31□□□□□ -0.44
Msx3P70354 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.31□□□□□ -0.44
Msx3P70354 Gm8885-201ENSMUST00000189382 598 ntBASIC12.31□□□□□ -0.44
Msx3P70354 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.31□□□□□ -0.44
Msx3P70354 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.31□□□□□ -0.44
Msx3P70354 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Msx3P70354 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.31□□□□□ -0.44
Msx3P70354 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Msx3P70354 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Msx3P70354 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Msx3P70354 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Msx3P70354 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Msx3P70354 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.31□□□□□ -0.44
Msx3P70354 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Msx3P70354 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Msx3P70354 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Msx3P70354 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Msx3P70354 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Msx3P70354 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Msx3P70354 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Msx3P70354 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Msx3P70354 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Msx3P70354 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Msx3P70354 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Msx3P70354 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Msx3P70354 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Msx3P70354 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Msx3P70354 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Msx3P70354 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Msx3P70354 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Msx3P70354 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.3□□□□□ -0.44
Msx3P70354 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.3□□□□□ -0.44
Msx3P70354 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Msx3P70354 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx3P70354 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx3P70354 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx3P70354 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Msx3P70354 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx3P70354 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx3P70354 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.3□□□□□ -0.44
Msx3P70354 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx3P70354 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Msx3P70354 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx3P70354 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Msx3P70354 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Msx3P70354 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx3P70354 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Msx3P70354 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx3P70354 Gm5070-201ENSMUST00000177599 862 ntBASIC12.3□□□□□ -0.44
Msx3P70354 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms