Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC9.67□□□□□ -0.86
Lmo4P61969 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC9.67□□□□□ -0.86
Lmo4P61969 Gm12407-201ENSMUST00000180219 324 ntBASIC9.67□□□□□ -0.86
Lmo4P61969 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Lmo4P61969 Gm28937-201ENSMUST00000185413 695 ntBASIC9.67□□□□□ -0.86
Lmo4P61969 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC9.67□□□□□ -0.86
Lmo4P61969 Gm29400-201ENSMUST00000187208 695 ntBASIC9.67□□□□□ -0.86
Lmo4P61969 Gm28662-201ENSMUST00000188446 695 ntBASIC9.67□□□□□ -0.86
Lmo4P61969 Gm28251-201ENSMUST00000188835 695 ntBASIC9.67□□□□□ -0.86
Lmo4P61969 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lmo4P61969 Ighv5-11-201ENSMUST00000193354 371 ntBASIC9.67□□□□□ -0.86
Lmo4P61969 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Lmo4P61969 Gm37318-201ENSMUST00000194325 695 ntBASIC9.67□□□□□ -0.86
Lmo4P61969 Gm38017-201ENSMUST00000194768 695 ntBASIC9.67□□□□□ -0.86
Lmo4P61969 Gm38151-201ENSMUST00000195085 289 ntBASIC9.67□□□□□ -0.86
Lmo4P61969 Gm37287-201ENSMUST00000195449 695 ntBASIC9.67□□□□□ -0.86
Lmo4P61969 Gm37793-201ENSMUST00000195548 695 ntBASIC9.67□□□□□ -0.86
Lmo4P61969 Gm9645-201ENSMUST00000197131 792 ntBASIC9.67□□□□□ -0.86
Lmo4P61969 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC9.67□□□□□ -0.86
Lmo4P61969 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Lmo4P61969 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Lmo4P61969 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Lmo4P61969 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Lmo4P61969 Gm45113-201ENSMUST00000207518 165 ntBASIC9.67□□□□□ -0.86
Lmo4P61969 Gm7940-201ENSMUST00000218195 769 ntBASIC9.67□□□□□ -0.86
Lmo4P61969 Gm10752-201ENSMUST00000218348 729 ntBASIC9.67□□□□□ -0.86
Lmo4P61969 Gm6430-201ENSMUST00000054664 1248 ntBASIC9.67□□□□□ -0.86
Lmo4P61969 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Lmo4P61969 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lmo4P61969 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Lmo4P61969 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Lmo4P61969 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lmo4P61969 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lmo4P61969 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC9.67□□□□□ -0.86
Lmo4P61969 Gm5053-201ENSMUST00000208361 1678 ntBASIC9.67□□□□□ -0.86
Lmo4P61969 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lmo4P61969 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC9.67□□□□□ -0.86
Lmo4P61969 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Lmo4P61969 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Lmo4P61969 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Lmo4P61969 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC9.67□□□□□ -0.86
Lmo4P61969 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lmo4P61969 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Lmo4P61969 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lmo4P61969 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Lmo4P61969 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lmo4P61969 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Lmo4P61969 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lmo4P61969 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lmo4P61969 CT009489.1-201ENSMUST00000227740 1893 ntBASIC9.66□□□□□ -0.86
Lmo4P61969 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lmo4P61969 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lmo4P61969 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Lmo4P61969 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lmo4P61969 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lmo4P61969 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lmo4P61969 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Lmo4P61969 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lmo4P61969 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC9.66□□□□□ -0.86
Lmo4P61969 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Lmo4P61969 Gm15172-201ENSMUST00000118945 1046 ntBASIC9.66□□□□□ -0.86
Lmo4P61969 Gm14441-201ENSMUST00000121960 540 ntBASIC9.66□□□□□ -0.86
Lmo4P61969 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Lmo4P61969 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Lmo4P61969 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Lmo4P61969 Mir7076-201ENSMUST00000183519 74 ntBASIC9.66□□□□□ -0.86
Lmo4P61969 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC9.66□□□□□ -0.86
Lmo4P61969 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC9.66□□□□□ -0.86
Lmo4P61969 Gm44980-201ENSMUST00000205826 314 ntBASIC9.66□□□□□ -0.86
Lmo4P61969 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.66□□□□□ -0.86
Lmo4P61969 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lmo4P61969 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Lmo4P61969 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Lmo4P61969 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Lmo4P61969 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lmo4P61969 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lmo4P61969 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lmo4P61969 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lmo4P61969 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Lmo4P61969 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Lmo4P61969 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lmo4P61969 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Lmo4P61969 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lmo4P61969 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lmo4P61969 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lmo4P61969 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lmo4P61969 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lmo4P61969 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lmo4P61969 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lmo4P61969 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Lmo4P61969 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Lmo4P61969 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Lmo4P61969 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lmo4P61969 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Lmo4P61969 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lmo4P61969 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC9.65□□□□□ -0.86
Lmo4P61969 Gm42748-201ENSMUST00000199354 2341 ntBASIC9.65□□□□□ -0.86
Lmo4P61969 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lmo4P61969 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lmo4P61969 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms